DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and mlnr

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_003200046.1 Gene:mlnr / 100536406 ZFINID:ZDB-GENE-130530-1015 Length:345 Species:Danio rerio


Alignment Length:386 Identity:112/386 - (29%)
Similarity:181/386 - (46%) Gaps:75/386 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 HDLGPPRDPLAIVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLFSLAISDFLLLLS 72
            |..|....|.:.:||||.:...:||.||.||..|.::|::.:.|.|.||.||.|:||||.::.||
Zfish     4 HHCGASLFPTSTLIPVTTICIFLFIIGVTGNTMTILIIQRFKDMKTTTNLYLSSMAISDLVIFLS 68

  Fly    73 GVPQEVSYIWSKYPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQAMSKLSR 137
             :|.::..:|...|::|||::|.....:.|...|||:|.||..::|||:|||.||..:|.....|
Zfish    69 -LPFDLYRLWKYVPWIFGEFVCRLSHYINEGCTNATILHITVLSMERYLAICFPFKAKAAITKRR 132

  Fly   138 AIRIIVLVWIMAIVTAIPQAAQFGIEHYS------GVEQCGIVRVIVKHSFQLSTF----IFFLA 192
            ...:|:.:|..|:::|.|.....|:|:.:      |..||...|..::.....:|.    .:|..
Zfish   133 VKYVILALWGFALLSAAPMFFLMGVEYENETMPDPGSRQCKHTRYAIESGLLHTTIWVSTAYFFC 197

  Fly   193 PMSIILVLYLLIGVHLYRST-LVEGPASVARRQQLKSVPSDTILYRYGGSGTAMSFNGGGSGAGT 256
            ||..:|.||..||..|::|. .:.||.:.||:                                 
Zfish   198 PMFCLLFLYGSIGRKLWKSRHELHGPNAAARQ--------------------------------- 229

  Fly   257 AGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYA-PARGAKLRDQ 320
                            ::|    |:.:::|..||..|.:||.|:|..|.:..:. ....|:|...
Zfish   230 ----------------KVN----RQTVKILAVVVSVFAICWLPYHIGRFLFTHVDDYHSARLSQN 274

  Fly   321 HEFVYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLFGKKVSKGSLNSRNNIESR 381
                   ....|.||:|||..:||:|||:||:|:|.|.|.:....:..:|:  :|.:|.:|
Zfish   275 -------FNVASMVLFYLSASVNPVLYNLMSNKYRSAVKRLFLLPRGYQGT--NRRHISTR 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 103/348 (30%)
TM helix 1 21..48 CDD:320262 12/26 (46%)
TM helix 2 55..81 CDD:320262 12/25 (48%)
TM helix 3 94..124 CDD:320262 12/29 (41%)
TM helix 4 136..158 CDD:320262 6/21 (29%)
TM helix 5 178..207 CDD:320262 9/32 (28%)
TM helix 6 277..307 CDD:320262 10/29 (34%)
TM helix 7 326..351 CDD:320262 11/24 (46%)
mlnrXP_003200046.1 7tm_4 24..>153 CDD:304433 50/129 (39%)
7tm_1 33..294 CDD:278431 88/321 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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