DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and trhr2

DIOPT Version :10

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_002936137.2 Gene:trhr2 / 100498158 XenbaseID:XB-GENE-1018399 Length:400 Species:Xenopus tropicalis


Alignment Length:415 Identity:119/415 - (28%)
Similarity:189/415 - (45%) Gaps:61/415 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VYSLIFI--TGVVGNISTCIVIKKNRSMHTATNYYLFSLAISDFLLLL-SGVP---QEVSYIWSK 84
            |:.::||  .|::|||...:|:...|.|.|.||.||.|||::|.::|: :|:|   ..::..|  
 Frog    32 VFLVLFICGIGIIGNIMVVLVVFTTRDMRTPTNCYLVSLAVADLMVLVAAGLPNVSDSLAGTW-- 94

  Fly    85 YPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQAMSKLSRAIRIIVLVWIMA 149
               |:|...|:|.........||:..:|||||||||||||||...|.:..:|||.|||.:|||. 
 Frog    95 ---VYGHAGCLGITYFQYLGINASSCSITAFTVERYIAICHPMRAQTVCTVSRAKRIIAIVWIF- 155

  Fly   150 IVTAIPQAAQFGIE--HYSGVEQ--CG--IVRVIVKHSFQLSTFIFFLAPMSIILVLYLLIGVHL 208
              |:|.....|.:.  |.:..:|  ||  :.|.:....:.....||::.|:.:..:||.|||..|
 Frog   156 --TSIYCMFWFFLVDIHVNKSQQVECGYKVSRNLYLPIYLADFAIFYVTPLLVATILYGLIGRIL 218

  Fly   209 YRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAMSFNGGGSGAGTAGLMGGSGAQLSSVRGR 273
            :.|.:.:.|.|...|.:.||....|                      .:...|...:.....:|.
 Frog   219 FLSPIPQHPESTTERWREKSSKEKT----------------------ESETEGNKPSNRLKTKGA 261

  Fly   274 LNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYAPARGAKLRDQHEFVYTVMTYVSGVLYYL 338
            |:  ..::|.:||..|||.|.|.|.|:....|:..:.         ...::.........:..|.
 Frog   262 LS--SRKQVTKMLAVVVVLFALLWMPYRTLVLVNSFM---------DKPYLDPWFLLFCRICVYA 315

  Fly   339 STCINPLLYNIMSHKFREAFKAVL-FGKKVSKGSLNSRNNIESRRLRRALTNSSQTQRFSIESAE 402
            ::.|||::||:||.|||.|||.:. .|.:..:.|:.......|.......|...:.::.|:|   
 Frog   316 NSAINPVIYNLMSQKFRTAFKRLCKCGHEAQRRSIYMTTTSYSMVKDGVNTGGEKKEKQSLE--- 377

  Fly   403 QPKPSIMQNPTNK--PPVAAQYAMI 425
              |.:|:...|||  |.....|:::
 Frog   378 --KTNIIAKQTNKAGPEGDLYYSVV 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 103/343 (30%)
TM helix 1 21..48 CDD:320262 8/23 (35%)
TM helix 2 55..81 CDD:320262 11/29 (38%)
TM helix 3 94..124 CDD:320262 15/29 (52%)
TM helix 4 136..158 CDD:320262 11/21 (52%)
TM helix 5 178..207 CDD:320262 8/28 (29%)
TM helix 6 277..307 CDD:320262 11/29 (38%)
TM helix 7 326..351 CDD:320262 6/24 (25%)
trhr2XP_002936137.2 7tmA_TRH-R 30..335 CDD:320126 103/343 (30%)
TM helix 1 30..56 CDD:320126 8/23 (35%)
TM helix 2 63..88 CDD:320126 11/24 (46%)
TM helix 3 101..131 CDD:320126 15/29 (52%)
TM helix 4 144..165 CDD:320126 10/23 (43%)
TM helix 5 188..217 CDD:320126 8/28 (29%)
TM helix 6 263..293 CDD:320126 11/31 (35%)
TM helix 7 303..328 CDD:320126 6/24 (25%)

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