DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and ghsr

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_002931618.1 Gene:ghsr / 100497774 XenbaseID:XB-GENE-484475 Length:359 Species:Xenopus tropicalis


Alignment Length:396 Identity:121/396 - (30%)
Similarity:187/396 - (47%) Gaps:86/396 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SHDLGPPRDPLAIV-IPV----TVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLFSLAISD 66
            |::...|.||:.:. :||    ||...|:||.|:.||:.|.:|:.|.:.|.|.||.||.|:|.||
 Frog    18 SNNYSWPEDPVFLFPVPVLTGITVTCILLFIIGISGNVMTMLVVSKYKDMRTTTNLYLSSMAFSD 82

  Fly    67 FLLLLSGVPQEVSYIWSKYPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQA 131
            .|:.|. :|.::..:|...|:.||..:|.....::|....:|:|.|||.:||||.|||.|...:.
 Frog    83 LLIFLC-MPLDLYRLWQYRPWNFGSSLCKLFQFVSECCTYSTILNITALSVERYFAICFPLKAKV 146

  Fly   132 MSKLSRAIRIIVLVWIMAIVTAIPQAAQFGIEHYSG-----VEQC---------GIVRVIVKHSF 182
            :....|...:|.::|.::.|:|.|.....|:||.:|     ..:|         |::.::|    
 Frog   147 VITKGRVKLVISVLWAVSFVSAGPIFVLVGVEHENGTNPLDTNECKATEYAIKSGLLTIMV---- 207

  Fly   183 QLSTFIFFLAPMSIILVLYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAMSF 247
             .::.|||..|:..:.|||.|||..|:|           |::       :||             
 Frog   208 -WTSSIFFFLPVFCLTVLYTLIGRKLWR-----------RKR-------ETI------------- 240

  Fly   248 NGGGSGAGTAGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLI---AIY 309
                 |..|            |:|.:.|    ::.::||..||..|.|||.|||..|.:   :..
 Frog   241 -----GPHT------------SIRDKHN----KQTVKMLAVVVFAFILCWLPFHVARYLFSKSFE 284

  Fly   310 APARGAKLRDQHEFVYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLFGKKVSKGSLNS 374
            |.:....|..|:      ...||.||:|||..|||:||||||.|:|.|...:...|:||:.:..:
 Frog   285 AGSLEIALISQY------CNLVSFVLFYLSAAINPILYNIMSKKYRVAACRLFRLKQVSRKATYT 343

  Fly   375 RNNIES 380
            .|:..|
 Frog   344 TNDESS 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 111/357 (31%)
TM helix 1 21..48 CDD:320262 12/30 (40%)
TM helix 2 55..81 CDD:320262 11/25 (44%)
TM helix 3 94..124 CDD:320262 12/29 (41%)
TM helix 4 136..158 CDD:320262 6/21 (29%)
TM helix 5 178..207 CDD:320262 11/28 (39%)
TM helix 6 277..307 CDD:320262 12/32 (38%)
TM helix 7 326..351 CDD:320262 14/24 (58%)
ghsrXP_002931618.1 7tm_4 48..334 CDD:304433 106/349 (30%)
7tm_1 53..316 CDD:278431 95/326 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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