DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and mlnr

DIOPT Version :10

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_002935793.1 Gene:mlnr / 100492328 XenbaseID:XB-GENE-940650 Length:364 Species:Xenopus tropicalis


Alignment Length:380 Identity:106/380 - (27%)
Similarity:180/380 - (47%) Gaps:84/380 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PLAIVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLFSLAISDFLLLLSGVPQEVSY 80
            |:..:||||:|..::.:.||:||..|.::|::.:.|.|.||:||.|:|:||.::||| :|.::..
 Frog    31 PITTLIPVTIVLLIVMVVGVIGNTITILIIRRYKEMRTTTNFYLSSMAMSDLIILLS-LPFDLYR 94

  Fly    81 IWSKYPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQAMSKLSRAIRIIVLV 145
            :|...|::||.::|.....::|....:|:|.|||.::|||:|||.|...:.:...:|...:||.:
 Frog    95 LWKSMPWIFGGFLCRFLHFISEGCTYSTILHITALSIERYLAICFPLKSKVLITKTRVKCVIVFL 159

  Fly   146 WIMAIVTAIPQAAQFGIEHYSGVE-------QCGIVRVIVKHSFQLS-----TFIFFLAPMSIIL 198
            |:.|:::|.|.....||.....:.       :|......| ||..|:     |..:|..||..::
 Frog   160 WVFALLSAGPFYFVVGIAQMYNITNDSDTGWECRYTFYAV-HSGLLNVMMWVTTTYFFIPMFCLI 223

  Fly   199 VLYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAMSFNGGGSGAGTAGLMGGS 263
            :||..||..|::|.                                                   
 Frog   224 ILYGFIGKKLWKSQ--------------------------------------------------- 237

  Fly   264 GAQLSSVRGR------LNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYAPARGAKLRDQHE 322
                :|:|||      .:|   |:.:|:|..||:.|.:||.|||..|:  ::|...|.::....:
 Frog   238 ----NSIRGRNTAQRDKSH---RQTMRILAVVVLAFIICWLPFHIGRI--VFANTEGYEMMKFSQ 293

  Fly   323 FVYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLFGKKVSKGSLNSRNN 377
            :    ...|:..|:|||..|||:|||::|.|:|.|...:|......|.:.|:..|
 Frog   294 Y----FNVVAIQLFYLSASINPILYNLISKKYRSAAYKLLRPSTAKKKTYNTIKN 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 100/354 (28%)
TM helix 1 21..48 CDD:320262 11/26 (42%)
TM helix 2 55..81 CDD:320262 12/25 (48%)
TM helix 3 94..124 CDD:320262 11/29 (38%)
TM helix 4 136..158 CDD:320262 7/21 (33%)
TM helix 5 178..207 CDD:320262 12/33 (36%)
TM helix 6 277..307 CDD:320262 12/29 (41%)
TM helix 7 326..351 CDD:320262 11/24 (46%)
mlnrXP_002935793.1 7tmA_motilin_R 36..325 CDD:320260 100/354 (28%)
TM helix 1 36..63 CDD:320260 11/26 (42%)
TM helix 2 70..95 CDD:320260 12/25 (48%)
TM helix 3 108..138 CDD:320260 11/29 (38%)
TM helix 4 150..172 CDD:320260 7/21 (33%)
TM helix 5 203..232 CDD:320260 9/28 (32%)
TM helix 6 250..280 CDD:320260 13/34 (38%)
TM helix 7 293..318 CDD:320260 11/28 (39%)

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