DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and mlnr

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_002935793.1 Gene:mlnr / 100492328 XenbaseID:XB-GENE-940650 Length:364 Species:Xenopus tropicalis


Alignment Length:380 Identity:106/380 - (27%)
Similarity:180/380 - (47%) Gaps:84/380 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PLAIVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLFSLAISDFLLLLSGVPQEVSY 80
            |:..:||||:|..::.:.||:||..|.::|::.:.|.|.||:||.|:|:||.::||| :|.::..
 Frog    31 PITTLIPVTIVLLIVMVVGVIGNTITILIIRRYKEMRTTTNFYLSSMAMSDLIILLS-LPFDLYR 94

  Fly    81 IWSKYPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQAMSKLSRAIRIIVLV 145
            :|...|::||.::|.....::|....:|:|.|||.::|||:|||.|...:.:...:|...:||.:
 Frog    95 LWKSMPWIFGGFLCRFLHFISEGCTYSTILHITALSIERYLAICFPLKSKVLITKTRVKCVIVFL 159

  Fly   146 WIMAIVTAIPQAAQFGIEHYSGVE-------QCGIVRVIVKHSFQLS-----TFIFFLAPMSIIL 198
            |:.|:::|.|.....||.....:.       :|......| ||..|:     |..:|..||..::
 Frog   160 WVFALLSAGPFYFVVGIAQMYNITNDSDTGWECRYTFYAV-HSGLLNVMMWVTTTYFFIPMFCLI 223

  Fly   199 VLYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAMSFNGGGSGAGTAGLMGGS 263
            :||..||..|::|.                                                   
 Frog   224 ILYGFIGKKLWKSQ--------------------------------------------------- 237

  Fly   264 GAQLSSVRGR------LNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYAPARGAKLRDQHE 322
                :|:|||      .:|   |:.:|:|..||:.|.:||.|||..|:  ::|...|.::....:
 Frog   238 ----NSIRGRNTAQRDKSH---RQTMRILAVVVLAFIICWLPFHIGRI--VFANTEGYEMMKFSQ 293

  Fly   323 FVYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLFGKKVSKGSLNSRNN 377
            :    ...|:..|:|||..|||:|||::|.|:|.|...:|......|.:.|:..|
 Frog   294 Y----FNVVAIQLFYLSASINPILYNLISKKYRSAAYKLLRPSTAKKKTYNTIKN 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 100/354 (28%)
TM helix 1 21..48 CDD:320262 11/26 (42%)
TM helix 2 55..81 CDD:320262 12/25 (48%)
TM helix 3 94..124 CDD:320262 11/29 (38%)
TM helix 4 136..158 CDD:320262 7/21 (33%)
TM helix 5 178..207 CDD:320262 12/33 (36%)
TM helix 6 277..307 CDD:320262 12/29 (41%)
TM helix 7 326..351 CDD:320262 11/24 (46%)
mlnrXP_002935793.1 7tm_4 43..>225 CDD:304433 56/183 (31%)
7tm_1 52..314 CDD:278431 87/327 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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