DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2b and AT5G23820

DIOPT Version :10

Sequence 1:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_197771.1 Gene:AT5G23820 / 832447 AraportID:AT5G23820 Length:164 Species:Arabidopsis thaliana


Alignment Length:85 Identity:19/85 - (22%)
Similarity:35/85 - (41%) Gaps:13/85 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FAALIGFTSSTDVSQCPKSKSKALAAG---DVSISNCPKSKCILKRNTEASIQMKIRPERDFQEL 72
            |..|:...:..|||.|  :....:.||   ::::|:      :|....:..|:..:...|...|.
plant    85 FTGLLKTYNLCDVSAC--NNEAEIEAGTNFELTLSD------VLYVGYDEEIKYSVSLRRKTLEE 141

  Fly    73 TSDIQGIILD--VPLPFPGY 90
            ...|..:.:|  ||.|.|.:
plant   142 EDPIIKMCVDFKVPAPAPAF 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 16/73 (22%)
AT5G23820NP_197771.1 ML 28..154 CDD:469700 15/76 (20%)

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