DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2b and LOC1273158

DIOPT Version :10

Sequence 1:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:XP_312110.5 Gene:LOC1273158 / 1273158 VectorBaseID:AGAMI1_014690 Length:151 Species:Anopheles gambiae


Alignment Length:139 Identity:36/139 - (25%)
Similarity:63/139 - (45%) Gaps:24/139 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SKALAAG-----DVSISNCPKSKCILKRNTEASIQMKIRPERDFQEL----TSDIQGIILDVPLP 86
            |:|.:.|     :|.|..|....|.|.|..:....:....:|....:    |:...|::.:.|| 
Mosquito    20 SRACSGGRPQPTNVVIEGCTAPPCNLVRGQDVIGLIDFTTDRAVTSMTTIATATALGVVTNYPL- 83

  Fly    87 FPGYYGTSA--CPHIYDEAGEKKVGCPLKAGQVYTYKNSFKILPVYPTVSLEIHWGLGDKHGDA- 148
                 |::|  |..:...:      |||.|.:..||:.:..||.:||.|||.|...|.|::.:: 
Mosquito    84 -----GSNAITCNFLQGSS------CPLSANEDVTYRLTMPILSIYPLVSLSIEIDLIDQNNNSV 137

  Fly   149 ACFQIPAKI 157
            :||.:.|::
Mosquito   138 SCFVVDAQV 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 35/135 (26%)
LOC1273158XP_312110.5 Npc2_like 21..144 CDD:238458 34/134 (25%)

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