DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2b and LOC1273113

DIOPT Version :10

Sequence 1:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:XP_312063.2 Gene:LOC1273113 / 1273113 VectorBaseID:AGAMI1_009599 Length:151 Species:Anopheles gambiae


Alignment Length:154 Identity:40/154 - (25%)
Similarity:67/154 - (43%) Gaps:15/154 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFVIFAALIGFTSSTDVSQCPKSKSKALAAGDVSISNCPKSKCILKRNTEASIQMKIRPERDFQE 71
            |.|.|:::: |.....|.||   |...|... |.::.|..:.|.|.:..:|::.:....:|....
Mosquito     9 LSVSFSSIV-FADVVTVHQC---KQGPLPVA-VDVTGCRTAPCELPKGQDAAVLVDFTADRHLTA 68

  Fly    72 LTSDIQGIILDVPLPFPGYYGTSACPHIYDEAGEKKVG--CPLKAGQVYTYKNSFKILPVYPTVS 134
            |...:......|.:||       ..|....:..:..||  ||:...:..||:....:|.|||::|
Mosquito    69 LVPKVHASFGGVTVPF-------ELPDDRKDGCQWLVGGMCPVSRDEDVTYELRLPVLAVYPSMS 126

  Fly   135 LEIHWGLGDKHGD-AACFQIPAKI 157
            |.:...|.|:... |.|||:.||:
Mosquito   127 LTVELQLVDQDNTVATCFQLEAKV 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 34/134 (25%)
LOC1273113XP_312063.2 Npc2_like 24..148 CDD:238458 34/134 (25%)

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