DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2b and Npc2f

DIOPT Version :10

Sequence 1:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:XP_312062.2 Gene:Npc2f / 1273112 VectorBaseID:AGAMI1_008460 Length:170 Species:Anopheles gambiae


Alignment Length:152 Identity:30/152 - (19%)
Similarity:58/152 - (38%) Gaps:31/152 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTSSTDVSQCPKSKSKALAAGDVSISNCPKSKCILKRNTEASIQMKIRPERDFQELTSDIQGIIL 81
            |.||:.:.:...:|...::   :::|:|..:.|.:.|.|...::.:.           ...|...
Mosquito    40 FVSSSLIFEDCGTKYDVIS---INLSSCATAPCTMHRGTNVKVKAEF-----------SANGAST 90

  Fly    82 DVPLPFPGYYGTSACPHIYDEAGEKKV---------GCPLKAGQVYTYKNSFKILPVYPTVSLEI 137
            |..|....|:       |.:....|.|         .|||:..|...:.....:....|.::.::
Mosquito    91 DSVLKHEAYF-------ILNSVKTKAVITPTTCEGSVCPLQGTQGLLFSADIYVNADLPPINGKL 148

  Fly   138 HWGLGDKHGDA-ACFQIPAKIK 158
            .|.|.:|.||. .|:|:|..|:
Mosquito   149 RWELRNKWGDVLLCYQLPVCIE 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 25/141 (18%)
Npc2fXP_312062.2 Npc2_like 47..167 CDD:238458 25/140 (18%)

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