DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2b and LOC1269932

DIOPT Version :10

Sequence 1:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:XP_308586.2 Gene:LOC1269932 / 1269932 VectorBaseID:AGAMI1_001487 Length:160 Species:Anopheles gambiae


Alignment Length:161 Identity:43/161 - (26%)
Similarity:68/161 - (42%) Gaps:14/161 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKL-SLGLFVIFAALIGFTSSTDVSQCPKSKSKALAAGDVSISNCPKSKCILKRNTEASIQMKIR 64
            :|| |:...|:.||.....:......|...:.   |..:|.:..|....|.|.|.::|.:.|...
Mosquito     4 LKLFSVVCLVVLAATNAIGAGVATRACTGGRP---APTEVRVEGCTVPPCDLVRGSDAIMDMDFT 65

  Fly    65 PERDFQELTSDIQGIILDVPLPF--PGYYGTSACPHIYDEAGEKKVGCPLKAGQVYTYKNSFKIL 127
            .......|.:.:....|.|..||  |. ...:||..:.:      ..||:.|.:..||:.|..:|
Mosquito    66 APFAAANLRTQVVATALGVTAPFELPA-DRAAACNWLLN------TQCPVSANEDITYRLSMPVL 123

  Fly   128 PVYPTVSLEIHWGLGDKHGDA-ACFQIPAKI 157
            .|||.|||.:...|.|..|.: |||::.|::
Mosquito   124 LVYPRVSLTVEIDLVDDAGQSLACFELDARV 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 36/134 (27%)
LOC1269932XP_308586.2 None

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