DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment foxo and Foxa1

DIOPT Version :10

Sequence 1:NP_650330.3 Gene:foxo / 41709 FlyBaseID:FBgn0038197 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_038967720.1 Gene:Foxa1 / 25098 RGDID:2807 Length:475 Species:Rattus norvegicus


Alignment Length:435 Identity:104/435 - (23%)
Similarity:159/435 - (36%) Gaps:122/435 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GFEPQTRARSNTWPCPRPENFVEPTDELDSTKASNQQLAPGDSQQAIQNANAAKKNSSRRNAWGN 97
            |..|...|.:   ||..|..:. |:: |..::|.    ..||::...::...||.         .
  Rat   126 GLGPYAAAMN---PCMSPMAYA-PSN-LGRSRAG----GGGDAKTFKRSYPHAKP---------P 172

  Fly    98 LSYADLITHAIGSATDKRLTLSQIYEWMVQNVPYFKDKGDSNSSAGWKNSIRHNLSLHNRFMRVQ 162
            .||..|||.||..|..|.||||:||:|::...||::     .:...|:|||||:||.::.|::|.
  Rat   173 YSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYR-----QNQQRWQNSIRHSLSFNDCFVKVA 232

  Fly   163 N--EGTGKSSWWMLNPEAKPGKSVRRRAASMETSRYEKRRGRAKKRVEALRQAGV---------V 216
            .  :..||.|:|.|:|::         ....|...|.:|    :||.:..:|.|.         .
  Rat   233 RSPDKPGKGSYWTLHPDS---------GNMFENGCYLRR----QKRFKCEKQPGAGGGSGGGGSK 284

  Fly   217 GLNDATPSPSSSVSEGLDHFPESPLHSG--GGFQLSPDFRQRASSNASSCGRLSPIRAQDLEPDW 279
            |:.:....||..|:..    .|||:|.|  |                         :|..||   
  Rat   285 GVPENRKDPSGPVNPS----AESPIHRGVHG-------------------------KASQLE--- 317

  Fly   280 GFP----------VDYQNTTMTQAHAQALEELTGTMADELTLCNQQQQGFSAASGLPSQPPPPPY 334
            |.|          :|:...|.| ..|..|:....:.|..::         |....|.|.||..|.
  Rat   318 GAPAPGPAASPQTLDHSGATAT-GGASELKSPASSSAPPIS---------SGPGALASVPPSHPA 372

  Fly   335 QPPQHQQAQQQQQQQSPYALNGPASGYNTLQPQSQCLLHRSLNCSCMHNARDGLSPNSVT----- 394
            ......::|...:....|:.|.|.|..|.:....|   ...|:......|.. .||...|     
  Rat   373 HGLAPHESQLHLKGDPHYSFNHPFSINNLMSSSEQ---QHKLDFKAYEQALQ-YSPYGATLPASL 433

  Fly   395 -------TTMSPAYPNS-EPSSDSLNTYSNVVLDGPADTAALMVQ 431
                   .|.||..|:: ||:....:.::|    .||....|..|
  Rat   434 PLGSASVATRSPIEPSALEPAYYQESLWNN----RPASAEELTPQ 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
foxoNP_650330.3 FH_FOXO 96..175 CDD:410806 32/80 (40%)
Foxa1XP_038967720.1 Forkhead_N 17..169 CDD:369872 11/51 (22%)
FH_FOXA1 157..268 CDD:410812 43/137 (31%)
HNF_C 393..457 CDD:430552 16/67 (24%)

Return to query results.
Submit another query.