DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3061 and Samd13

DIOPT Version :10

Sequence 1:NP_650328.1 Gene:CG3061 / 41707 FlyBaseID:FBgn0038195 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_064474.1 Gene:Samd13 / 56764 RGDID:708544 Length:223 Species:Rattus norvegicus


Alignment Length:208 Identity:62/208 - (29%)
Similarity:86/208 - (41%) Gaps:66/208 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 DYYEVLGVSKTATDSEIKKAYKKLALQLHPDKNKAPG----AVEAFKALGNAAGVLTDAEKRKNY 166
            :||:||||.:.|:.|:||||:.:||||:|||||  ||    |.|.||.:..|..:|:||:|||:|
  Rat     3 NYYKVLGVPQDASSSDIKKAFHQLALQVHPDKN--PGDREAAEEKFKQVAEAYQILSDAKKRKDY 65

  Fly   167 DLYGIN----ESHNGHGNNGGGHHGHGQYYNNEYGYS---------RGFQADISAEELF--NMFF 216
            |....:    |...|.|             .:|..:.         |.||..|..|:||  :..|
  Rat    66 DRSRWSRTKEELIRGDG-------------RDETNWEEEICSRRPRRTFQTVIEDEDLFSGDYLF 117

  Fly   217 NGGFPQQNVHMRQQRRRQQAREDREGNNSSALVNLLPIVLLIGLSMMSSFFISDPMYSLTPSHKY 281
            .|       .|...||           .||....:.||:              |..:|...|.:.
  Rat   118 TG-------PMTHSRR-----------GSSNFFTVTPII--------------DTGFSTFVSQES 150

  Fly   282 SVKRETNSLKVPY 294
            ....:.:...|||
  Rat   151 KSSPDDSEAFVPY 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3061NP_650328.1 DnaJ_bact 106..>220 CDD:274090 49/132 (37%)
DUF1977 264..364 CDD:462754 6/31 (19%)
Samd13NP_064474.1 PRK14300 3..>177 CDD:172788 62/208 (30%)
DnaJ 3..66 CDD:395170 34/64 (53%)

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