DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3061 and Dnaja4

DIOPT Version :10

Sequence 1:NP_650328.1 Gene:CG3061 / 41707 FlyBaseID:FBgn0038195 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001020582.1 Gene:Dnaja4 / 300721 RGDID:1310035 Length:555 Species:Rattus norvegicus


Alignment Length:240 Identity:69/240 - (28%)
Similarity:100/240 - (41%) Gaps:67/240 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AAGKIEKAEKFLLKAERLFPTDNAKKLLAQLKSTPSNESNGKSRTAG---ASDEKDSGPRKRVNS 81
            |:|:.:..::         ||...|...:..| ||:.|....:|...   :|.|.|..|.::.:.
  Rat    99 ASGRRDSRQR---------PTSTTKPESSTPK-TPATEHPNMARGGNQNWSSGESDGQPEEQTSE 153

  Fly    82 DSRSSAPDYTKDQLEAVRKVKTCKDYYEVLGVSKTATDSEIKKAYKKLALQLHPDKNKAPGAVEA 146
            ::.......|:              ||::|||..:|:..||||||:||||:.|||||  |...|.
  Rat   154 ENGDKMVKETQ--------------YYDILGVKPSASPEEIKKAYRKLALKYHPDKN--PDEGEK 202

  Fly   147 FKALGNAAGVLTDAEKRKNYDLYGINESHNGHGNNGGGHHGHGQYYNNEYGYSRGFQADISAEEL 211
            ||.:..|..||:|.:||..||..|......|    |.|              |..|.   |..::
  Rat   203 FKLISQAYEVLSDPKKRDIYDQGGEQAIKEG----GSG--------------SPSFS---SPMDI 246

  Fly   212 FNMFFNGGFPQQNVHMRQQRRRQQAREDREGNNSSALVNLLPIVL 256
            |:|||.||             .:..|| |.|.|   :|:.|.:.|
  Rat   247 FDMFFGGG-------------GRMTRE-RRGKN---VVHQLSVTL 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3061NP_650328.1 DnaJ_bact 106..>220 CDD:274090 45/113 (40%)
DUF1977 264..364 CDD:462754
Dnaja4NP_001020582.1 PHA03247 8..>126 CDD:223021 8/36 (22%)
PTZ00037 144..552 CDD:240236 57/185 (31%)
Blue background indicates that the domain is not in the aligned region.

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