DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT1G69650

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_177123.1 Gene:AT1G69650 / 843301 AraportID:AT1G69650 Length:294 Species:Arabidopsis thaliana


Alignment Length:335 Identity:71/335 - (21%)
Similarity:115/335 - (34%) Gaps:95/335 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 ASASPSASTSSSSSYQQSSVQQQHYNCAHPAQQQQHHHHHHSSSSSSSSSSSSSHHHHNSSSSSN 394
            ||.|...|::...:::.           ||........|:.|....::|.|...:.....||...
plant     3 ASCSAPVSSTIKKNWRD-----------HPPSSYSLKIHNFSQLEKTTSFSGHKYQSRLFSSGDI 56

  Fly   395 SNNQQQPQQSPLCLV-------LLVKCPNSKEFCNAAANFCDKR--------------------- 431
            :.|.:......:.:.       |:...|.::.|........:|:                     
plant    57 TGNVKDNGSGFISMYVELDSSSLMESKPPTEVFAELRFFVYNKKQNKYFTKDVEIKRFDALKMVW 121

  Fly   432 -LPV-NECQASQTARVTSNLHASSSTMAVSRVPSPPLPEVNTPVAENWCYTQVKVVKFSY---MW 491
             ||. |||:                 ..|..:.:|||        .||........|.||   .|
plant   122 GLPKGNECE-----------------FGVDVIVAPPL--------TNWEILSFHDEKLSYPKVTW 161

  Fly   492 TINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKS----- 551
            ::.|||..:|  .|..|.:.||.|..:   |.|::.|||.......|||::|.|.. |::     
plant   162 SVKNFSQWKE--NECSKPNRFSIGGRE---WVLKLFPKGNSRAKGKYLSVFLYLAD-NETLKPDE 220

  Fly   552 EVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFK--KFIRRDFL----LDEANGLLPEDKL 610
            ::..:....|||.......|   .|...:.:|.::|:.  ||:..|.:    ||:      ||.|
plant   221 KIFTQVVVRILNPLGSNHVA---SRLNYWHKGSNFGYGWCKFLSLDKIRKTYLDK------EDTL 276

  Fly   611 TIFCEVSVVA 620
            .|..|..||:
plant   277 MIEAEFEVVS 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 43/152 (28%)
BTB_POZ_roadkill-like 637..757 CDD:349654
BACK_roadkill_like 752..825 CDD:350595
AT1G69650NP_177123.1 MATH 24..>125 CDD:238068 12/100 (12%)
MATH 157..283 CDD:238068 38/140 (27%)
Blue background indicates that the domain is not in the aligned region.

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