DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT5G48510

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_199662.1 Gene:AT5G48510 / 834907 AraportID:AT5G48510 Length:224 Species:Arabidopsis thaliana


Alignment Length:171 Identity:47/171 - (27%)
Similarity:87/171 - (50%) Gaps:15/171 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   652 EKFS-DVTL----SVGGREFQAHKAILAARSDVFAAMFEHEMEERK-----LNRVAITDVDHEVL 706
            ||:. ||.|    |..|....|||.|||:||:||..||  |::|.|     :..:.::::.||.|
plant    20 EKWQVDVMLKAKNSDEGSAISAHKLILASRSEVFKNMF--ELDEFKTSTKHVETITLSEMKHEEL 82

  Fly   707 KEMLRFIYTG---KAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHS 768
            :..:.||.:.   .:.|:::.|..|..|||||.:..|:.:|...|..:||:..:.:.|:||.:..
plant    83 EAFVEFICSDGSMLSANVKQHARSLYLAADKYEILHLRDLCRTELISSLSLLNSLDLLVLAQIPF 147

  Fly   769 ADQLKAQTIDFINTHATDVMETSGWQNMITTHSHLIAEAFR 809
            ...|..::..:|..:.:.:..:..::..:..:.:|..|..:
plant   148 DKVLNDESFSYIKNNISTIASSDEFKLFVAGNPNLAVEIMK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 40/117 (34%)
BACK_roadkill_like 752..825 CDD:350595 9/58 (16%)
AT5G48510NP_199662.1 BTB 20..123 CDD:395526 36/104 (35%)
Blue background indicates that the domain is not in the aligned region.

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