DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT5G26320

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_198004.1 Gene:AT5G26320 / 832701 AraportID:AT5G26320 Length:352 Species:Arabidopsis thaliana


Alignment Length:179 Identity:45/179 - (25%)
Similarity:72/179 - (40%) Gaps:27/179 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   447 SNLHASSSTMAVSRVPSPPLPEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSST 511
            :|.::..:.:.::||.....|             ..|:|      ||.:||..:.. .|..:|||
plant    39 NNSYSLKTNLGLTRVLREERP-------------SSKIV------TITSFSVIKGR-SEAFESST 83

  Fly   512 FSAGANDKLKWCLRVNPKGLDEE-SKDYLSLYLLLVSCNKS----EVRAKFKFSILNAKREETKA 571
            |.| |..|.::.|.||....|.: ..:.::||:.:......    ||....|..:.|.|..:...
plant    84 FEA-AGYKWRFMLFVNGNQNDPDGGHENMALYVGIKETESFPRGWEVNVDLKLFVHNEKLHKYLT 147

  Fly   572 MESQRAYRFVQGKD-WGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVV 619
            :......|:...|. |||...|.|..|||...|.:..|.|:...|:|:|
plant   148 VSDGTVKRYEAAKTYWGFGNLIPRTTLLDPNEGYILHDTLSFGAEISIV 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 41/143 (29%)
BTB_POZ_roadkill-like 637..757 CDD:349654
BACK_roadkill_like 752..825 CDD:350595
AT5G26320NP_198004.1 MATH 63..193 CDD:238068 37/137 (27%)
MATH 216..341 CDD:238068
Blue background indicates that the domain is not in the aligned region.

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