DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT5G26300

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_198002.1 Gene:AT5G26300 / 832699 AraportID:AT5G26300 Length:349 Species:Arabidopsis thaliana


Alignment Length:396 Identity:86/396 - (21%)
Similarity:130/396 - (32%) Gaps:110/396 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 LCLVLLVKCPNSKEFCNAAANFCDKRLPVNECQASQTARVTSNLHASSSTMAVSRVPSPPLPEVN 470
            :||.||....:|.||.            :.:....:.|...|: ::.......:||.....|.  
plant    11 ICLALLFTTSSSAEFL------------IQQVTGGRGAEYNSS-YSLKENFGGTRVLRDERPS-- 60

  Fly   471 TPVAENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEES 535
                             |.:.||.|||..:..: |..:||.|.|..   .||.|.:...|...:|
plant    61 -----------------SKILTITNFSVIKGRV-EPYESSVFEAAG---YKWRLVLYVNGNPNDS 104

  Fly   536 -KDYLSLYLLLVSCNKS----EVRAKFKFSILNAKREETKAMESQRAYRFVQGK-DWGFKKFIRR 594
             .|::|||:.:......    ||....|..|.|.|..:..|:.......:...| :|||.:.|..
plant   105 GNDHISLYVRIEETEYLPRGWEVNVDLKLFIHNGKLNKYLAISDGTLKLYNDAKREWGFGQLIPH 169

  Fly   595 DFLLDEANGLLPEDKLTIFCEVSVVADSVN------ISG-QSNIVQFKVPECKLSEDLGNLFDNE 652
             .......|.:.:|..:...|:.:|..:..      ||. .:|:..:|:....:.||        
plant   170 -VTFYNTYGYIEQDIGSFGAEIFIVKPAQQQEKVTFISNPPTNVFTWKILHFSILED-------- 225

  Fly   653 KF--SDVTL--------------SVGGREF--------QAHKAILAARSDVFAAMFEHEMEERKL 693
            ||  ||..|              ..|||.:        |.|||...|.:...||....: .:|..
plant   226 KFYYSDDFLVEDRYWRLGFNPKGDGGGRPYALPIFLFAQGHKANAVATNTWGAANLRLK-NQRST 289

  Fly   694 NRVAITDVDHEVLKEMLRFIYT----------GKAPNLEKMADDLLAAADKYALEKLKVMCEEAL 748
            |.               |.|||          |...|...:..||..|:..|.:....:.  ||.
plant   290 NH---------------RQIYTAAWYPIGSGYGVGVNNIILLADLNDASQGYLVNNAIIF--EAA 337

  Fly   749 CVNLSV 754
            .|.:||
plant   338 MVKVSV 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 36/143 (25%)
BTB_POZ_roadkill-like 637..757 CDD:349654 34/152 (22%)
BACK_roadkill_like 752..825 CDD:350595 2/3 (67%)
AT5G26300NP_198002.1 MATH 63..190 CDD:238068 33/131 (25%)
MATH 213..336 CDD:238068 30/148 (20%)

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