DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and BPM1

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001190334.1 Gene:BPM1 / 832018 AraportID:AT5G19000 Length:442 Species:Arabidopsis thaliana


Alignment Length:426 Identity:121/426 - (28%)
Similarity:191/426 - (44%) Gaps:86/426 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 MAVSRVPSPPLPEVNTPVAENWCYTQVKVVKFSYMWTIN---NFSFCREEM------GEVLKSST 511
            |..:||.|    ||::..:::  .:|...|..|...|:|   .|..|...:      |:.:.|.|
plant     1 MGTTRVCS----EVSSGSSKS--LSQSLTVSTSTTETVNGFHEFKICGYSLAKGVGVGKYVASDT 59

  Fly   512 FSAGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCNKSEVRAKFKFSIL----NAKREE--- 568
            |..|.   ..|.:...|.|.. |::..|:||::.|.| ..::|||.|:.:::    |.|.:.   
plant    60 FMVGG---YSWAIYFYPDGKSPEDNSSYVSLFIALAS-EGADVRALFELTLVDQSGNGKHKVHSH 120

  Fly   569 -TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIV 632
             .:|::|.......:|..||:|:|.||..|  |::..|.|:.|.:.|.|.||.   :::......
plant   121 FGRALDSGPYTLKYRGSMWGYKRFFRRSSL--ESSDYLKENSLLVRCRVGVVK---SVTEGPRYY 180

  Fly   633 QFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVA 697
            ...||...|.:.||||.::.|..||...|.|..|.|||.:||.||.||.|.....:.:|....:.
plant   181 NIPVPVSNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVFNAQLFGPLGDRNTKCIT 245

  Fly   698 ITDVDHEVL-----------------------------------KEMLRFIYTGKAPNLEKM--- 724
            |.|::..:.                                   |.:|.|||..:.|:::::   
plant   246 IEDMEAPIFKVLPLTLLLIVYSRMYHPGSSPGALLLFSSLLTRDKVLLHFIYWDELPDMQELIGT 310

  Fly   725 ---------ADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFI 780
                     |..||||||:||||:||.:||..||..:::.|.|.||.||:.|...||||..:.|:
plant   311 DSTLASTLVAQHLLAAADRYALERLKAICESKLCEGVAINTVATTLALAEQHHCLQLKAVCLKFV 375

  Fly   781 ----NTHATDVMETSGWQNMITTHSHLIAEAFRALA 812
                |..|  ||:|.|:..:..:...|:.|..:.:|
plant   376 ALPENLKA--VMQTDGFDYLKESCPSLLTELLQYVA 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 44/155 (28%)
BTB_POZ_roadkill-like 637..757 CDD:349654 48/166 (29%)
BACK_roadkill_like 752..825 CDD:350595 21/65 (32%)
BPM1NP_001190334.1 MATH 34..167 CDD:238068 37/138 (27%)
BTB_POZ_BPM_plant 189..344 CDD:349589 45/154 (29%)
BACK_AtBPM-like 344..407 CDD:350516 21/64 (33%)

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