DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT4G09780

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_192716.2 Gene:AT4G09780 / 826567 AraportID:AT4G09780 Length:427 Species:Arabidopsis thaliana


Alignment Length:393 Identity:78/393 - (19%)
Similarity:141/393 - (35%) Gaps:101/393 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   477 WCYTQVKVV-----KFSYMWTINNFSFCREE-----------MGEV------LKSSTFSAGANDK 519
            :.||.:|..     ||..|.|:      |||           ..||      .:|:.|.|..:  
plant    36 YIYTTLKSTIFCPKKFIIMETL------REEAPSSYLMKLVGFSEVKFSHQPYESADFDAAGH-- 92

  Fly   520 LKWCLRVNPKG-LDEESKDYLSLYLLL--VSCNKSEVRAKFKFSILNAKREETKAMESQRAYRF- 580
             ||.|...|.| ::|..||::|:|..:  |..::.::..:.||.:.|...::....:......: 
plant    93 -KWRLIFYPAGKVEEGGKDHISIYARVENVGASEMQIDVELKFFLYNHNAKKYSVFQDGTVKHYS 156

  Fly   581 VQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPEC-----K 640
            .:.|:.||.:.:.|....|..||....|...:..|:.|:..   |.....:|..:.|..     |
plant   157 KEKKECGFAQMLLRSKFNDPKNGYTDGDACIVGVEIFVIKP---IEKVERVVFTQNPPTNKFTWK 218

  Fly   641 LSEDLGNLFDNEKFSDVTLSVGGREF------QAHKAILAARSDVFAAMFEH-----------EM 688
            :| |...|.|.:........||.|::      :..|.:.|.  .|:....|:           ::
plant   219 IS-DFSKLGDKKYHYSDEFVVGERKWRIKISPKGDKKVRAL--SVYVQAMEYLPNAVASTTYAKL 280

  Fly   689 EERKLNRVAITDVDHEVLKEMLRFIY---------------TGKAPNLEKMADDLLAAADKYALE 738
            :.:.:|:.....::.....:...|:|               |.:..::|.:.|:    :..|.:|
plant   281 KLQLMNQKNTNHIEKRGTYQTSFFLYLVFHFFSREKEDGYGTSELISVEDLNDE----SKGYLVE 341

  Fly   739 KLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFIN--THATDVMETSGWQNMITTHS 801
            ...|:....|||   .||..:.        .|..|.:.. .:|  .||     .|.|:.....|:
plant   342 DTIVLETTLLCV---TETKVKL--------CDMCKYKFF-LLNPRQHA-----KSHWKKKKNMHN 389

  Fly   802 HLI 804
            ||:
plant   390 HLL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 37/163 (23%)
BTB_POZ_roadkill-like 637..757 CDD:349654 26/156 (17%)
BACK_roadkill_like 752..825 CDD:350595 12/55 (22%)
AT4G09780NP_192716.2 MATH 64..192 CDD:238068 27/130 (21%)
MATH 213..347 CDD:238068 21/140 (15%)

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