DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT4G04090

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_192318.1 Gene:AT4G04090 / 825720 AraportID:AT4G04090 Length:192 Species:Arabidopsis thaliana


Alignment Length:167 Identity:47/167 - (28%)
Similarity:78/167 - (46%) Gaps:14/167 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   650 DNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHE--MEERKLNRVAITDVDHEVLKEMLRF 712
            |:||  |..:|       |||.||:|||:||..|||.:  ....||..:.::::.||||:..:.|
plant    31 DSEK--DAAIS-------AHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDF 86

  Fly   713 IYTGKAPNLEKM---ADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKA 774
            .|:..:...||.   |..|.:||..|.:.:|..:|.:.|..:|::..|...|.||.:...:.|..
plant    87 TYSDGSMLSEKAKQHAMSLYSAAKDYEIPRLWCLCRKELIASLNMSNALRVLQLAQIPYDESLSV 151

  Fly   775 QTIDFINTHATDVMETSGWQNMITTHSHLIAEAFRAL 811
            .....|......:..::..:..:..|.:...|..||:
plant   152 AAFTTIKNSKLKLSSSTKVKVFVVNHPNGPLEITRAI 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 37/111 (33%)
BACK_roadkill_like 752..825 CDD:350595 11/60 (18%)
AT4G04090NP_192318.1 BTB 18..129 CDD:395526 36/106 (34%)
Blue background indicates that the domain is not in the aligned region.

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