DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdx and AT3G58410

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_191400.1 Gene:AT3G58410 / 825010 AraportID:AT3G58410 Length:328 Species:Arabidopsis thaliana


Alignment Length:300 Identity:78/300 - (26%)
Similarity:114/300 - (38%) Gaps:72/300 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 ENWCYTQVKVVKFSYMWTINNFSF--CREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKD 537
            |::..:..|.|...:.|.|.|||.  |::     ..|..|..|   ..||.|.:.|||   .:.|
plant    16 ESFTTSMTKQVGKKFAWVIKNFSSLQCKK-----FYSVPFQIG---DCKWRLSIYPKG---NNCD 69

  Fly   538 YLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 601
            ||||:|        || |.|| |:.:..|...|.    |.|...|.. .|||...:....|.||.
plant    70 YLSLFL--------EV-ADFK-SLPSGWRRYVKL----RLYIVKQEMWGWGFLYMLPLTKLHDEK 120

  Fly   602 NGLLPEDKLTIFCEVSVVA--DSVNISGQSNIVQFKVPECKLSED---LGNLFDNEKFSDVTLSV 661
            .|.|...:|.|..||..:.  |.:|.|.:|......:.:.||::|   ..:|.:.......::.|
plant   121 EGFLVNGELMIVAEVDALGFIDPLNESEESEDPTQPLKKIKLNDDGAVSSDLLEEASPRKESMEV 185

  Fly   662 GGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEKMAD 726
            .|  ||    :|.::.:....:||..           .|:..|         :..|...|.|...
plant   186 NG--FQ----VLPSQVESVRLIFERH-----------PDIASE---------FRAKNQYLRKACM 224

  Fly   727 DLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADL 766
            |.|            :...|.||.:|. |.:.|.|:.||:
plant   225 DFL------------LSLVETLCQSLQ-EFSNEDLVEADI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 46/142 (32%)
BTB_POZ_roadkill-like 637..757 CDD:349654 23/122 (19%)
BACK_roadkill_like 752..825 CDD:350595 6/14 (43%)
AT3G58410NP_191400.1 MATH 29..136 CDD:238068 43/131 (33%)

Return to query results.
Submit another query.