DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdx and AT3G58360

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_191395.1 Gene:AT3G58360 / 825005 AraportID:AT3G58360 Length:298 Species:Arabidopsis thaliana


Alignment Length:306 Identity:75/306 - (24%)
Similarity:113/306 - (36%) Gaps:61/306 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 WTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCN--KSEV 553
            |.|.|||....:.   :.|..|..|.   .||...|.|||   .:.|||.|||.:....  ..|.
plant    11 WAIENFSSLHSKK---IYSDPFIVGG---CKWRFLVYPKG---NNVDYLFLYLEVADYESLSPEW 66

  Fly   554 R--AKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN----GLLPEDKLTI 612
            |  |::..:::|....:......::.:..||...||....    |.|:|.|    |.|...:|.|
plant    67 RRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSM----FPLNEINAKDSGFLVNGELKI 127

  Fly   613 FCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARS 677
            ..|:.|:                       |.:|.|..:|:.|.:..|:....||    :|.::.
plant   128 VAEIE
VL-----------------------EVIGKLDVSEETSTIMESMDFNGFQ----LLPSQV 165

  Fly   678 DVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEKMADDLLAAADKY-ALEKL- 740
            |....|||...|.....|:...::....:..:|..|.|.:....|....||   |:.| ||..: 
plant   166 DFVRHMFEKHPEIASEFRLKNPNLRAGYMSLLLSLIETLRQSPQELNKVDL---AEGYVALRSIT 227

  Fly   741 ----KVMCEEALCVNLS----VETAAETLILADLHSADQLKAQTID 778
                ||...|...|.:|    .|.|.||.:.......:.||.:.:|
plant   228 DAGFKVDWLEKKLVEISEKKNKEEAGETRMQEINEELESLKQKCLD 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 38/137 (28%)
BTB_POZ_roadkill-like 637..757 CDD:349654 31/129 (24%)
BACK_roadkill_like 752..825 CDD:350595 8/31 (26%)
AT3G58360NP_191395.1 MATH 8..132 CDD:238068 37/133 (28%)
PEARLI-4 <170..289 CDD:253129 27/107 (25%)

Return to query results.
Submit another query.