Protein Alignment rdx and RTM3

DIOPT Version :10

• Sequence 1: NP_650326.3
• Gene: rdx / 41704
• FlyBaseID: FBgn0264493
• Length: 829
• Species: Drosophila melanogaster
• Sequence 2: NP_567063.1
• Gene: RTM3 / 825004
• AraportID: AT3G58350
• Length: 301
• Species: Arabidopsis thaliana
• Alignment Length: 270
• Identity: 62/270 - (22%)
• Similarity: 101/270 - (37%)
• Gaps: 83/270 - (30%)

  Fly   491 WTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYL---LLVSCNKSE 552
            |||.||:   ..:.:::.|..|..|.   .||.||..|||.:..:.  |||:|   :..|.....
plant    11 WTIKNFA---SLLSDLIYSDHFVVGG---CKWHLRAYPKGYNNANS--LSLFLGVAVPTSLPSGW 67

  Fly   553 VR-AKFKFSILNA---KREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIF 613
            .| .||:.:::|.   |..::|..|.::.:. .:..:||.......:.:..:.:|.|...:|.|.
plant    68 RRHTKFRLTLVNQLSDKLSQSKLNELEQWFD-EKTTNWGLSSMCPLNEIHAKDSGFLLNGELKIV 131

  Fly   614 CEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSD 678
            .|:.|:                       |.:|.|...|:.|.:|.:|....||    :|.:::.
plant   132 VEIKVL-----------------------ETIGKLDVTEETSTITETVDVNGFQ----LLPSQAK 169

  Fly   679 VFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNL-------------------EKM 724
            ..:.||                ..|..|...||    .|.|||                   ::|
plant   170 SVSRMF----------------AKHPELASDLR----PKNPNLRTGYMSLLLSLIETLSQLPQQM 214

  Fly   725 A-DDLLAAAD 733
            : ||||.|.|
plant   215 SKDDLLDAYD 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdx	NP_650326.3	MATH_SPOP	483..621	CDD:239743	35/136 (26%)
		BTB_POZ_roadkill-like	637..757	CDD:349654	27/117 (23%)
		BACK_roadkill_like	752..825	CDD:350595
RTM3	NP_567063.1	MATH	8..135	CDD:238068	34/132 (26%)
		PEARLI-4	<156..279	CDD:253129	21/93 (23%)