DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G58340

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_191393.1 Gene:AT3G58340 / 825003 AraportID:AT3G58340 Length:325 Species:Arabidopsis thaliana


Alignment Length:288 Identity:70/288 - (24%)
Similarity:106/288 - (36%) Gaps:58/288 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 KVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVS 547
            |.|...:.|.|.|||....|     :..:......| .||.|...|||.   ..|||||||.:..
plant     3 KAVDKKFCWEIKNFSSLNSE-----RCHSVPVVIGD-CKWRLVAFPKGY---KADYLSLYLEVAD 58

  Fly   548 CNK--SEVR--AKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN----GL 604
            ...  |..|  .||:..|:|...:|....:..:.:.......|||:..:    ||.|.|    |.
plant    59 FKSLPSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENML----LLTELNAKDGGF 119

  Fly   605 LPEDKLTIFCEV-------------SVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSD 656
            |...::.|..||             .::..|..|:....:.| :|.|.....||.|. ..|....
plant   120 LVNGQVMIVAEVEFLEVIGTLDESEEIIKSSDLINKTQEVAQ-QVKEIIQPNDLINK-TQEVAQQ 182

  Fly   657 VTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPN- 720
            |..|:....||    :|.::.:....:|      :|...:|   |..:|..:.||..:.....| 
plant   183 VKESIDVNGFQ----VLPSQVESVRRIF------KKHPDIA---VGFQVKNQHLRKTFMNFLVNV 234

  Fly   721 -------LEKMADDLLAAADKYALEKLK 741
                   |::::::.|...| .||..||
plant   235 IETMCQSLQELSNEDLVEVD-IALTYLK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 41/158 (26%)
BTB_POZ_roadkill-like 637..757 CDD:349654 25/113 (22%)
BACK_roadkill_like 752..825 CDD:350595
AT3G58340NP_191393.1 MATH 8..132 CDD:238068 38/136 (28%)
Blue background indicates that the domain is not in the aligned region.

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