DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G58290

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_191388.1 Gene:AT3G58290 / 824998 AraportID:AT3G58290 Length:282 Species:Arabidopsis thaliana


Alignment Length:305 Identity:68/305 - (22%)
Similarity:121/305 - (39%) Gaps:82/305 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 YMWTINNFSFCREEMGEVLKSSTFSAGAND-----KLKWCLRVNPKG-------LDEESKDYLSL 541
            ::|.|.|||..:.:          ....:|     .:.|.|...|:|       ..:.:.|:|||
plant    12 FVWVIKNFSSLQLQ----------DCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHLSL 66

  Fly   542 YLLL----VSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 602
            ||.:    :.|...:. .:|:|:::|...|.:......|.:...:..:||:::.|....|.|..:
plant    67 YLEVDFESLPCGWRQY-TQFRFTVVNQISEHSSVKREGRKWFDKKAPEWGWEEMISLTKLNDINS 130

  Fly   603 GLLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSED-----LGNLFDNEK-FSDVTLSV 661
            |.:...:|.|..||... ::|:.|..:.:          .:|     ||....:|: ..|||:.|
plant   131 GFVVNGELMIVAEVE
TF-EAVSTSQVAAV----------RDDSEWTLLGYYSSSEEDKDDVTVVV 184

  Fly   662 GGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLK-EMLRFIYTGKAPNLEKMA 725
            .|..      :|.::.:....:||...:       ..|::   ||| :.|:.:|.|...:|.|  
plant   185 KGFH------VLDSQVNQVKEIFEKHPD-------LATNL---VLKNQNLKNVYMGFLLDLIK-- 231

  Fly   726 DDLLAAADKYALEKL-KVMCEEALCVNLSVETAAETLILADLHSA 769
                      .|.|| |.:.||.|  |.:..|      |:||.:|
plant   232 ----------TLSKLPKELTEEDL--NFADST------LSDLTNA 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 32/147 (22%)
BTB_POZ_roadkill-like 637..757 CDD:349654 29/127 (23%)
BACK_roadkill_like 752..825 CDD:350595 5/18 (28%)
AT3G58290NP_191388.1 MATH 11..145 CDD:238068 31/143 (22%)

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