DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G58280

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001319791.1 Gene:AT3G58280 / 824997 AraportID:AT3G58280 Length:298 Species:Arabidopsis thaliana


Alignment Length:212 Identity:56/212 - (26%)
Similarity:85/212 - (40%) Gaps:51/212 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   486 KFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYL----LLV 546
            |.::.|.|.:....|.....:|...::         |.|...|     ....|.||:|    .|:
plant     9 KKTFGWVIKDLQTHRRCSVPILIGDSY---------WRLVALP-----NENGYFSLFLEVNMELI 59

  Fly   547 SCNKSEVRAKFKFSILNAKREETKAMES--QRAYRFV--QGKDWGFKKFIRRDFLLDEANGLLPE 607
            .|..... .:|:.:|:|    ....:.|  ::.:|:.  ..|:||||..|....|.:...|.|..
plant    60 PCGWRRY-VEFRMTIVN----HISPIHSVDKKGWRWFDENTKNWGFKDMIPAVILNNVNVGFLLN 119

  Fly   608 DKLTIFCEVSV--VADSVNISGQSNIVQFKVPECK--LSEDLGNLFDNEKFSDVTLSVGGREFQA 668
            .::||..||.|  ..|::|.|        :|.|..  .||||.|. ||     ||:.|.|  || 
plant   120 GEITIIAEVEVHEFIDTLNAS--------QVEELSDDSSEDLQNK-DN-----VTIEVNG--FQ- 167

  Fly   669 HKAILAARSDVFAAMFE 685
               :|.::.|...|:||
plant   168 ---VLDSQVDQVNAIFE 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 33/144 (23%)
BTB_POZ_roadkill-like 637..757 CDD:349654 19/51 (37%)
BACK_roadkill_like 752..825 CDD:350595
AT3G58280NP_001319791.1 MATH 14..129 CDD:238068 30/133 (23%)
PEARLI-4 146..290 CDD:253129 18/48 (38%)
Blue background indicates that the domain is not in the aligned region.

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