DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G58270

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_191386.1 Gene:AT3G58270 / 824996 AraportID:AT3G58270 Length:343 Species:Arabidopsis thaliana


Alignment Length:364 Identity:80/364 - (21%)
Similarity:125/364 - (34%) Gaps:89/364 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 KVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVS 547
            |.|...:.|.|.|||   .:......|..|..   |..||.|...|||...|.   |||||.:..
plant     3 KEVDNKFTWVIKNFS---SQQSRKNYSDEFFV---DGCKWRLLAFPKGNGVEK---LSLYLAVAG 58

  Fly   548 CNKSEV-------RAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLL 605
               ||.       .|.|.||::|...:|.......:.:......||||...:....|.|:..|.|
plant    59 ---SEFLPDGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFL 120

  Fly   606 PEDKLTIFCEVSVV-----------ADSVNISGQSNIVQFKVPE---------CKLSEDLGNLFD 650
            ...:|.|..:|||:           ::.......|.:.:..|||         .|:.|:.|...:
plant   121 VNGELKIVVDVSVLEVIGKLDVPVESEETTTKALSELEENDVPEESEETTKALSKVDENDGAESN 185

  Fly   651 N--EKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFI 713
            :  ::.|.|..|:....|:    :|.::.:..:.:||..           .|:..|         
plant   186 DSLKEASSVKESMDVNGFR----VLPSQVETVSCIFERH-----------PDIASE--------- 226

  Fly   714 YTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTID 778
            :..|..:|.....::|       |..:|.||:           :.:.|...||..||...|...|
plant   227 FGPKNQHLRSAYMNVL-------LSLIKTMCQ-----------STQELSKDDLSDADAALAYLTD 273

  Fly   779 ------FINTHATDVMETSGWQNMITTHSHLIAEAFRAL 811
                  ::.....:|.|....:....|..|.|.|..:.|
plant   274 AGLNLNWLEEKLEEVSEKKENEEAGETRVHEIEEELKEL 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 43/155 (28%)
BTB_POZ_roadkill-like 637..757 CDD:349654 21/130 (16%)
BACK_roadkill_like 752..825 CDD:350595 14/66 (21%)
AT3G58270NP_191386.1 MATH 7..131 CDD:238068 38/135 (28%)
PEARLI-4 163..>304 CDD:253129 31/182 (17%)

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