DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G58260

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_191385.1 Gene:AT3G58260 / 824995 AraportID:AT3G58260 Length:321 Species:Arabidopsis thaliana


Alignment Length:334 Identity:76/334 - (22%)
Similarity:134/334 - (40%) Gaps:63/334 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 KVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVS 547
            |.:..::.|.|.|.|..:   |..::|..|..|.   .||.|...|:..|.:....||:||.:..
plant     3 KQINNTFTWVIKNLSTLQ---GLEVRSKIFVVGG---CKWRLIAYPEVNDADGYLSLSVYLGVPD 61

  Fly   548 CNKS-----EVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPE 607
            |.:|     :..|||..:|:|...|....::..:|:.......|||...:....:.|:..|.|..
plant    62 CCESLPSGWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDKYGGFLVN 126

  Fly   608 DKLTIFCEVSVV-----ADSVNISGQSNIVQFKVPECKLSEDLGNLFDN-----EKFSDVTLSVG 662
            |::.:...|.|:     .|:..:|...:|..|||...:: :.:..||::     .|||       
plant   127 DEVMVAVAVDVIEVVGSLDAPEMSESMDIKGFKVLPSQV-KSVNRLFESHPDIASKFS------- 183

  Fly   663 GREFQAHKAILAARSDVFAAMFE--HEMEERKLNRVAITDVDHEVLKEMLRFIYT--GKAPNLEK 723
                ..::::..|..:|...:.|  |:      :.:.|::.|....|..|.::.:  .|...|||
plant   184 ----IKNQSLKTAYMNVLLCLAETLHQ------SPMEISEDDLSDAKTTLAYMKSVGFKLDWLEK 238

  Fly   724 MADDLL----AAADKYALEKLKVMCEEAL------CVNLSVETAAETLILADLHSADQLKAQTID 778
            ..|:|.    ..|||..::.:    ||.|      |.:|      |.|:..:.......||..:.
plant   239 KLDELFEKKKEEADKIRMQNI----EEELKDLRQKCSSL------EALLKKEKTGVLAAKAPFLF 293

  Fly   779 FINTHATDV 787
            |.|.:..|:
plant   294 FNNVNDDDL 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 36/147 (24%)
BTB_POZ_roadkill-like 637..757 CDD:349654 27/138 (20%)
BACK_roadkill_like 752..825 CDD:350595 8/36 (22%)
AT3G58260NP_191385.1 MATH 7..136 CDD:238068 33/134 (25%)
PEARLI-4 149..>269 CDD:253129 30/141 (21%)

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