DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G58250

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_191384.1 Gene:AT3G58250 / 824994 AraportID:AT3G58250 Length:317 Species:Arabidopsis thaliana


Alignment Length:336 Identity:86/336 - (25%)
Similarity:141/336 - (41%) Gaps:87/336 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   486 KFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNK 550
            |||  |.|.|||..:.|.   :.|..|   ..|..:|.|...|||.|.:| |:|||||   ...:
plant    10 KFS--WVIKNFSSLQSEK---IYSDQF---VIDGCRWRLLAFPKGNDTKS-DHLSLYL---DVAE 62

  Fly   551 SEV-------RAKFKFSILN------AKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 602
            ||.       .|:|.|:|:|      ::|:||.....::.      .||||...:....|..|.:
plant    63 SESLPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKV------SDWGFTNLVPLIELKAEDS 121

  Fly   603 GLLPEDKLTIFCEVSVV----------ADSVNISG------QSNIVQ--FKV-PECKLSEDLGNL 648
            |.|.:.:|.|..|:.|:          ::|::::|      |:..|:  |:: |:......:.|.
plant   122 GFLVKGELKIVVEIEVLEVIGLLNVSESESMDVNGFHVLPSQAKYVKSLFEIHPDIATKFRIKNQ 186

  Fly   649 FDNEKFSDVTL----SVGGREFQAHKAILAARSDVFAAM-------FEHEMEERKLNRV------ 696
            :....:.:|.|    :|.....:..|..||   |.:.|:       |:.:..::||::|      
plant   187 YLKTGYMNVLLCLIETVRRSPKEISKNDLA---DAYVALESLTDHGFKLDWLKKKLDQVTQKKEK 248

  Fly   697 --AITDVDHEVLKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAE 759
              |.....||:.:|:         .:|:....||.|     .|:|:|..|.: |...|..|.|..
plant   249 EAAGETRMHEIGEEL---------KDLKLKCSDLEA-----QLDKVKWKCSD-LEAQLVKEKADV 298

  Fly   760 TLILADLHSAD 770
            ...:|.|.|:|
plant   299 LAAIAPLGSSD 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 47/157 (30%)
BTB_POZ_roadkill-like 637..757 CDD:349654 29/138 (21%)
BACK_roadkill_like 752..825 CDD:350595 7/19 (37%)
AT3G58250NP_191384.1 MATH 10..136 CDD:238068 46/143 (32%)

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