DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G58240

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_191383.1 Gene:AT3G58240 / 824993 AraportID:AT3G58240 Length:317 Species:Arabidopsis thaliana


Alignment Length:335 Identity:77/335 - (22%)
Similarity:118/335 - (35%) Gaps:101/335 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 YMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCN--KS 551
            :.|.|.|  || ....:.:.|..|..|.|   ||.:....|..|  ...:|.|.|.||.|.  .|
plant     9 FTWVIKN--FC-SVSPKPIYSDQFLIGGN---KWHILAYSKKRD--GHQFLCLDLELVDCEFLPS 65

  Fly   552 EVR--AKFKFSILNAKREETKAMESQRAYRFVQGKDWGFK--KFIRRDFLLDEANGLLPEDKLTI 612
            |.|  .|..|:::|.   .:|.:..|...:....|....|  .......|.|:.:|.|.:.::.|
plant    66 EWRKVVKVSFTVVNF---FSKKLSRQIGLKHCFNKKERSKGGSLFHLSELTDKKSGFLVDGEVEI 127

  Fly   613 FCEVSVV-------------------------------------ADSVNISG------QSNIVQ- 633
            ..:::|:                                     |..||:.|      |..||. 
plant   128 VAQITVLETDRRFHVSKDYNMEMQCWDGMATTLVENKELNDDDKAGLVNVKGFQVLPSQLGIVNR 192

  Fly   634 --FKVPE-----CKLSEDLGNLFDNEKFSDVTLSV-GGREFQAHKAILAARSDVFAAM------- 683
              .|.||     |..:::|...:.|..||.:.|.. |.:|...|..     ||...|:       
plant   193 IFEKHPETALECCTKNQELRASYINVIFSLIKLLYKGAQEHSTHDL-----SDAEGALAYMKNLG 252

  Fly   684 FEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEKMADDLLAAADKYA-----LEKLKVM 743
            |:.:..|:||:.|      .|:.|:..|      ...:||...||:   :|:.     |||.|:.
plant   253 FKLDWLEKKLDEV------KEIKKKCER------VTEMEKELHDLM---NKHTNVSKLLEKEKLE 302

  Fly   744 CEEALCVNLS 753
            .:.|...:||
plant   303 IKNASAPDLS 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 35/174 (20%)
BTB_POZ_roadkill-like 637..757 CDD:349654 34/135 (25%)
BACK_roadkill_like 752..825 CDD:350595 2/2 (100%)
AT3G58240NP_191383.1 MATH 7..132 CDD:238068 34/133 (26%)

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