DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G58230

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_191382.1 Gene:AT3G58230 / 824992 AraportID:AT3G58230 Length:153 Species:Arabidopsis thaliana


Alignment Length:119 Identity:26/119 - (21%)
Similarity:44/119 - (36%) Gaps:34/119 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 CLRVNPKGL-DEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDW 586
            ||.  |:.| :||.::..:..|.||...       ||...|..:.||....:             
plant    60 CLA--PQELTEEEIRNAENTLLELVEVG-------FKLDWLKNRLEELCVKK------------- 102

  Fly   587 GFKKFIRRDFLLDEANGLLPEDKLTIFC--------EVSVVADSVNISGQSNIV 632
              ||...|...:.|.:|::.|.:..::.        |...|:||..: |..::|
plant   103 --KKMEARGARMRELDGMIVEQRRVLWALETELKNEENEAVSDSARL-GFDDVV 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 22/106 (21%)
BTB_POZ_roadkill-like 637..757 CDD:349654
BACK_roadkill_like 752..825 CDD:350595
AT3G58230NP_191382.1 None
Blue background indicates that the domain is not in the aligned region.

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