DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G46190

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001326080.1 Gene:AT3G46190 / 823764 AraportID:AT3G46190 Length:311 Species:Arabidopsis thaliana


Alignment Length:216 Identity:55/216 - (25%)
Similarity:85/216 - (39%) Gaps:64/216 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   459 SRVPSPPL---PEV-----NTPVAENWCYTQVKVVKFS--------------------------- 488
            |.:..|||   .|:     |..::|.:.|.:|:.|||.                           
plant   112 SSITDPPLDVYAEIKFFVYNYGISEYYTYQEVEPVKFDSVQQEWGRWIDVFVAQRNKSEVFSYDE 176

  Fly   489 ------YMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKD-YLSLYLLLV 546
                  :.|::.|||....:.   ..|..||:|..:   |.|:|.|.| |...|| .||||||..
plant   177 NISNPVFTWSLPNFSTLTLDS---YTSDPFSSGDRN---WVLKVYPNG-DGVGKDNSLSLYLLSE 234

  Fly   547 SCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQG------KDWGFKKFIRRDFLLDEANGLL 605
            |..|:.|||..:  :||       .:.|....:.|:|      ..||:::||....|.|...|.:
plant   235 SNEKNYVRATLR--VLN-------QIGSDNVEKPVEGWPNAAENGWGYQEFIPLADLQDATKGFV 290

  Fly   606 PEDKLTIFCEVSVVADSVNIS 626
            .:|.|.:..|:..::....|:
plant   291 VDDLLEVEVEIMAISKQTPIN 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 45/177 (25%)
BTB_POZ_roadkill-like 637..757 CDD:349654
BACK_roadkill_like 752..825 CDD:350595
AT3G46190NP_001326080.1 MATH 54..>156 CDD:238068 12/43 (28%)
MATH 181..301 CDD:238068 41/135 (30%)
Blue background indicates that the domain is not in the aligned region.

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