DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G44790

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_190065.1 Gene:AT3G44790 / 823610 AraportID:AT3G44790 Length:324 Species:Arabidopsis thaliana


Alignment Length:338 Identity:72/338 - (21%)
Similarity:123/338 - (36%) Gaps:120/338 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 YMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKS-- 551
            :.|.|.|||..:   .:.:.|..|..|.   .||.|    ||.  ::.:||||: |:|:.:|:  
plant     6 FTWVIKNFSSLQ---SKYINSDKFVIGG---CKWFL----KGY--QNANYLSLF-LMVATSKTLP 57

  Fly   552 ---EVRAKFKFSILNAKREETKAMESQRAYRFVQGKDW--------GFKKFIRRDFLLDEANGLL 605
               ....:|:.:::|...:|   :..||     :.:.|        |.:..|....|..:..|.|
plant    58 CGWRRYTRFRLTVVNQLSDE---LSQQR-----ETETWFDQNVVLSGNRHMISLTKLNAKKGGFL 114

  Fly   606 PEDKLTIFCEVSV--VADSVNISGQSNIVQFKVPECKLSED------------------------ 644
            ..:::.|..||.|  |...:::|..|..|...:...:|::|                        
plant   115 VNNEVKIVVEVD
VLQVIGKLDVSEGSQEVTQPLKRIRLNDDGVSVKQSIDVNGFQVLPSQVESVK 179

  Fly   645 ---------------------------LGNLFDN--EKFSDVTLSVGGREFQAHKAILAAR-SDV 679
                                       |.:|.|.  :...|:::...|   ||.||:...: || 
plant   180 RIFERHPNMALEFRAKNQHVRTSCMNVLLSLIDTLCQSLQDISIDDLG---QAEKALRYLKDSD- 240

  Fly   680 FAAMFEHEMEERKLNRVAITDVDHEV-------LKEMLRFIYTGKAPNLEKMADDLLAAADKYAL 737
                |:.:..||||..|....::.::       |:|.|: |:..|..::|..            |
plant   241 ----FKVDWLERKLEEVKEKKMEEQIGKSRMQELEEELK-IFKQKCSDIEAQ------------L 288

  Fly   738 EKLKVMCE--EAL 748
            ||.|..|.  |||
plant   289 EKEKQKCSDIEAL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 36/146 (25%)
BTB_POZ_roadkill-like 637..757 CDD:349654 33/175 (19%)
BACK_roadkill_like 752..825 CDD:350595
AT3G44790NP_190065.1 MATH 5..126 CDD:238068 33/140 (24%)
Blue background indicates that the domain is not in the aligned region.

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