DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and BPM6

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_189956.2 Gene:BPM6 / 823478 AraportID:AT3G43700 Length:415 Species:Arabidopsis thaliana


Alignment Length:393 Identity:110/393 - (27%)
Similarity:200/393 - (50%) Gaps:53/393 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 SSSTMAVSRVPSPPLPEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCRE-EMGEVLKSSTFSAG 515
            :|.:.:.:.:|.    ::.:|.:..   :..:....|:.:.|..:|..:. .:|:.:.|..||.|
plant     8 TSGSSSPNTIPD----QIESPTSSR---SVTQTTNGSHQFVIQGYSLAKGIGVGKHIASDNFSVG 65

  Fly   516 ANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVS-CNKSEVRAKFKFSILNAKREETKAMESQ--- 575
            .   .:|.:.|.|.|.: |::..|:|::::|.| |  :||||.|:.|:::...:....:.|.   
plant    66 G---YQWTIFVYPDGKNPEDNSSYVSVFIVLASEC--TEVRALFELSLVDQSGKGKHKVHSHFNR 125

  Fly   576 --------RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIV 632
                    ..||   |..||:|:|.||..|  |.:..|.:|.|.|.|.|.||...::.   ..::
plant   126 SLDGGPYTLKYR---GSMWGYKRFFRRSLL--ETSDYLKDDCLKINCTVGVVVSEMHC---PRLL 182

  Fly   633 QFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVA 697
            ...||:.:|....|.|.|..:.||||..|.|.:|||||.:|||||..|.:||.:.:.|.. :.|.
plant   183 SIHVPDSELGSHFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENN-SDVV 246

  Fly   698 ITDVDHEVLKEMLRFIYTGKAP-NLEKMA------------DD-----LLAAADKYALEKLKVMC 744
            |:|::.:|.|.:|.|:|....| ::|.:.            ||     |||||:.|.|.:|:::|
plant   247 ISDLEPKVFKALLHFMYKDSLPGDVEPLTAHSFDLLRPSEIDDTLIVKLLAAAEMYNLSRLRLLC 311

  Fly   745 EEALCVNLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHSHLIAEAFR 809
            |..:|..:|:.:.::.|.|:|.::|.:||:.::.|...:...|::|..::::.....:|.:|..:
plant   312 ESHICKGISISSVSKILALSDKYNASELKSVSLKFTAENLAAVLQTKAYEDLKDDCPNLQSELLK 376

  Fly   810 ALA 812
            |:|
plant   377 AVA 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 44/151 (29%)
BTB_POZ_roadkill-like 637..757 CDD:349654 49/137 (36%)
BACK_roadkill_like 752..825 CDD:350595 14/61 (23%)
BPM6NP_189956.2 MATH 36..169 CDD:238068 41/142 (29%)
BTB_POZ_BPM_plant 191..316 CDD:349589 46/125 (37%)
BACK_AtBPM-like 316..377 CDD:350516 13/60 (22%)

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