DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT3G27040

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001319652.1 Gene:AT3G27040 / 822322 AraportID:AT3G27040 Length:271 Species:Arabidopsis thaliana


Alignment Length:311 Identity:76/311 - (24%)
Similarity:120/311 - (38%) Gaps:111/311 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 YMWTINNFSFCREEMGE-VLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSE 552
            :.|.|.|::    .:|. .:.|.||.||   :.||.|...|||  ....||..||:.:.  |...
plant    10 FTWVIKNYN----SLGSGSVYSDTFKAG---RCKWRLLAFPKG--NNIYDYFFLYICVP--NSES 63

  Fly   553 V------RAKFKFSILNAKREETKAMESQR-AYRFVQGKD--WGFKKFIRRDFLLDEA----NGL 604
            :      |||..|:::|   :....:..|| |..:...||  .||:..    |||.|.    .|.
plant    64 LPSGWRRRAKVSFTMVN---QIPGGLSQQREAVYWFDEKDTTHGFESM----FLLSEIQSSDKGF 121

  Fly   605 LPEDKLTIFCEVSVV-----------ADSVNISGQSNIVQFKVPECKLSEDLGNLFD-------- 650
            |...::.|..||.|:           .:.::|:|      |:||..:: |.:.:||:        
plant   122 LVNGEVKIVAEVD
VLEVIGELDVPEEPERIDING------FQVPASQV-ESMNSLFEKYRGFASK 179

  Fly   651 --------NEKFSDVTLSV------------GGREFQAHKAILAARSDVFAAMFEHEMEERKLNR 695
                    .:.|.||.||:            .|...:|:.|:    ..|..|.|:.:..|:|   
plant   180 IFPKNQHLRKTFLDVVLSMTEILCKFPEELSSGDLAEAYSAL----RFVTKAGFKLDWLEKK--- 237

  Fly   696 VAITDVDHEVLKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEE 746
                      |||      |||: .|:::.:|         |:.|||.|.:
plant   238 ----------LKE------TGKS-RLQEIEED---------LKDLKVKCAD 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 42/156 (27%)
BTB_POZ_roadkill-like 637..757 CDD:349654 30/138 (22%)
BACK_roadkill_like 752..825 CDD:350595
AT3G27040NP_001319652.1 MATH 9..134 CDD:238068 40/141 (28%)
Blue background indicates that the domain is not in the aligned region.

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