DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and BPM2

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_566275.1 Gene:BPM2 / 819793 AraportID:AT3G06190 Length:406 Species:Arabidopsis thaliana


Alignment Length:397 Identity:121/397 - (30%)
Similarity:188/397 - (47%) Gaps:52/397 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 TARVTSNLHASSSTMAVSRVPSPPLPEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCR-EEMGE 505
            |.||:..:..||.:.|.|...|.               ::.:.:..|:.:.|:.:|..: ..:|:
plant     3 TIRVSKEVPGSSKSTAQSLTEST---------------SRTETINGSHEFKISGYSLVKGMGIGK 52

  Fly   506 VLKSSTFSAGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREET 569
            .:.|.||..|.   ..|.:...|.|.. |::..|:||::.|.| ..::|||.|:.::::....|.
plant    53 YVASDTFMVGG---YSWAIYFYPDGKSPEDNSVYVSLFIALAS-EGADVRALFELTLVDQSGNER 113

  Fly   570 --------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSVNIS 626
                    :.:||.......:|..||:|:|.:|..|  |::..|.::.|.:.|.|.||.......
plant   114 HKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRSLL--ESSDYLKDNGLLVRCCVGVVKSRTEGP 176

  Fly   627 GQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEER 691
            ...||   .||...|.:..|.|.::.|.:|||..|.|..|.|||.:|||||.||.|.....:...
plant   177 RCYNI---PVPVSGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSE 238

  Fly   692 KLNRVAITDVDHEVLKEMLRFIYTGKAPNLEKM------------ADDLLAAADKYALEKLKVMC 744
            ..|.:.|.||...:.|.:|.|||..:.|:::.:            |..||||||:||||:|:.:|
plant   239 NTNCIIIEDVQAPIFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADRYALERLRTIC 303

  Fly   745 EEALCVNLSVETAAETLILADLHSADQLKAQTIDFI----NTHATDVMETSGWQNMITTHSHLIA 805
            |..||..:|:.|.|.||.||:.|...||||..:.||    |..|  ||||.|:..:..:...|::
plant   304 ESKLCEGISINTVATTLALAEQHHCFQLKAACLKFIALPENLKA--VMETDGFDYLKESCPSLLS 366

  Fly   806 EAFRALA 812
            |....:|
plant   367 ELLEYVA 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 38/147 (26%)
BTB_POZ_roadkill-like 637..757 CDD:349654 49/131 (37%)
BACK_roadkill_like 752..825 CDD:350595 24/65 (37%)
BPM2NP_566275.1 MATH 33..166 CDD:238068 35/138 (25%)
BTB_POZ_BPM_plant 188..308 CDD:349589 45/119 (38%)
BACK_AtBPM-like 308..371 CDD:350516 24/64 (38%)

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