DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G42480

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001318406.1 Gene:AT2G42480 / 818848 AraportID:AT2G42480 Length:370 Species:Arabidopsis thaliana


Alignment Length:268 Identity:77/268 - (28%)
Similarity:118/268 - (44%) Gaps:53/268 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   490 MWT--------INNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV 546
            ||.        |:|||    |..:|:.|..|.:|.   .:|.|.:.||| ...:.|::||| |.|
plant     1 MWNQKPCFRFEIDNFS----EKKDVIASKAFVSGG---CEWFLYLYPKG-QSLNDDHMSLY-LSV 56

  Fly   547 SCNKS-----EVRAKFKFSILN-AKREETKAMESQRAYRF-VQGKDWGFKKFIRRDFLLDEANGL 604
            :.:||     :..|||.||:|| :.:|..::..||....| ||...||.:|.:.....  |..|.
plant    57 ANSKSLGSGWKRSAKFYFSVLNESDKELYRSTISQEFCLFCVQALAWGIRKALPLSKF--EEKGF 119

  Fly   605 LPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAH 669
            |.:|||.:  || .:.:...:.|:...|..|..| :..|.:|:   .:..|.|||.  .:.|..|
plant   120 LEKDKLIV--EV-YIKNFEAVDGEGGGVSKKEEE-ETVEIIGS---QDYASQVTLV--RKIFAEH 175

  Fly   670 KAI---LAARSDVFAAMFEH----------EMEERKLNRV--AITDVDHEVLKEMLRFIYTGKAP 719
            ..|   ...::.||...:.:          |:.|.|::.|  .|.:|..|:.|   |.....:.|
plant   176 PEIAEEFKPKNQVFKKEYMNILRNAYRKVSELAEVKMDWVKSKIEEVSLEIKK---RNDEVSEVP 237

  Fly   720 NLEKMADD 727
            ...|:|||
plant   238 LDNKIADD 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 48/145 (33%)
BTB_POZ_roadkill-like 637..757 CDD:349654 26/106 (25%)
BACK_roadkill_like 752..825 CDD:350595
AT2G42480NP_001318406.1 MATH 6..132 CDD:238068 46/139 (33%)
COG4913 <213..>368 CDD:443941 11/36 (31%)
Blue background indicates that the domain is not in the aligned region.

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