DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G40450

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_181577.1 Gene:AT2G40450 / 818639 AraportID:AT2G40450 Length:209 Species:Arabidopsis thaliana


Alignment Length:176 Identity:48/176 - (27%)
Similarity:84/176 - (47%) Gaps:12/176 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   651 NEKF-SDVTLSVGGRE----FQAHKAILAARSDVFAAMFEHE---MEERKLNRVAITDVDHEVLK 707
            ||:: :||.|..|..:    ..|||.:|.|||:||..:.|.:   ...:::..|.::::.||.|:
plant    19 NEQWQADVRLKAGDSDETTSIFAHKLVLVARSEVFKKILESDEFKASSKQMETVTLSEMKHEELE 83

  Fly   708 EMLRFIY--TGK--APNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHS 768
            ..:.|||  .|.  :.:|:|.|..|..|||||.:..|:.:|...|..:|:...|...|.||.:..
plant    84 AFVEFIYRVDGSICSASLKKHARSLFHAADKYEIPHLRDLCRNELISSLNSSNALSILELAQIPF 148

  Fly   769 ADQLKAQTIDFINTHATDVMETSGWQNMITTHSHLIAEAFRALATQ 814
            ...|.......|.|:.:.:.....::..:..|.:|..:..:|..|:
plant   149 DKALNDPAFTTIITNISTIASGDEFKLFVANHPNLAVDIMKASITR 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 37/117 (32%)
BACK_roadkill_like 752..825 CDD:350595 12/63 (19%)
AT2G40450NP_181577.1 BTB 14..129 CDD:395526 35/109 (32%)
Blue background indicates that the domain is not in the aligned region.

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