DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G32870

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_180846.3 Gene:AT2G32870 / 817848 AraportID:AT2G32870 Length:416 Species:Arabidopsis thaliana


Alignment Length:240 Identity:63/240 - (26%)
Similarity:98/240 - (40%) Gaps:44/240 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 PQQSPLCLVLLVKCPNSKEFCNAAANFCD-----KRLPVNECQASQTARVTSNLHASSSTMAVSR 460
            ||..|....:||...|.|:.....|||..     :|..||: :|...|.::.    ......|:|
plant   196 PQTGPDYCFVLVGHQNEKKRSQGLANFISHTDLKERFLVND-KAGFYAEISD----VQPNFPVTR 255

  Fly   461 VPSPPLPEVNTPVAENWCYTQVKVVKFS-----YMWTINNFSFCREEMGEVLKSSTFSAGANDKL 520
            :|.      ....||.:     |:::||     :.|.|..||   ...||...|..|:.|..   
plant   256 IPR------TMGTAERF-----KLIEFSPKNSRFTWKITQFS---SFDGEEHSSYEFTVGPR--- 303

  Fly   521 KWCLRVNPKGLDEESKDYLSLYLL----LVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRF- 580
            :|.|.:.|||..:...:.|||||.    :.:..|....|.:|..:|:  :......|::..|.| 
plant   304 RWKLVMYPKGNGDGKGNSLSLYLFASDYVTNGPKGGTLAIYKLRVLD--QLNRNHCETECRYWFP 366

  Fly   581 ---VQGKD--WGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVA 620
               |...|  ||..||:..:.|...:.|.|..|::.|..|:|:|:
plant   367 YNPVNQMDSLWGRPKFLPLEELHKSSRGFLVNDQIYIGVEISIVS 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 43/153 (28%)
BTB_POZ_roadkill-like 637..757 CDD:349654
BACK_roadkill_like 752..825 CDD:350595
AT2G32870NP_180846.3 MATH 124..244 CDD:238068 15/48 (31%)
MATH 277..407 CDD:238068 37/137 (27%)
Blue background indicates that the domain is not in the aligned region.

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