DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G30600

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001189642.1 Gene:AT2G30600 / 817610 AraportID:AT2G30600 Length:855 Species:Arabidopsis thaliana


Alignment Length:284 Identity:52/284 - (18%)
Similarity:82/284 - (28%) Gaps:136/284 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRKLSILFALLSVLTVQCSGYYDH----AKWHCG------------INKLTETISEWLAKPFDYH 49
            |.|.|::|              ||    ::|:..            |..:|..|..:....|.||
plant   304 MDKASLIF--------------DHVYLGSEWNASNLEELHSTGVGYILNVTREIDNFFPGMFAYH 354

  Fly    50 GVNQCCQ------AH-DDHYYHHTLSREDADRVFCDC---------------LEENANW------ 86
            .:....:      :| :|.|:..|.::::..:....|               ::|| .|      
plant   355 NIRVYDEETTDLLSHWNDAYHFITKAKKNKSKCLVHCKMGVSRSASTVIAYAMKEN-GWSMEKAY 418

  Fly    87 ---------------FVRNLI--EPIFCKSVQTY-AIWQKFTNQNSWSSQFTIKPPTTTT----- 128
                           |:|.|:  |.|...|.|.: .:|.               ||...|     
plant   419 NFVKQKRSVTRPNAGFMRQLLEYEGILDASKQRHNKLWM---------------PPIFPTSYGQD 468

  Fly   129 TTESPLNYYL-----------------------ELLHQREREFELRKEQEARRREELEREN---- 166
            |.|:..||.|                       ||:.....|.|:         |||||:.    
plant   469 TLETEFNYGLNEDYVKAETLPESYCLRHLNNPCELIEPLSVELEV---------EELERDALLGD 524

  Fly   167 ---ERFRQEWNFFQQSKRQQSKFE 187
               ...||...|.:...|::..||
plant   525 TDVGTIRQNSPFLEGEIRKKLDFE 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654
BACK_roadkill_like 752..825 CDD:350595
AT2G30600NP_001189642.1 Methyltransf_FA 50..152 CDD:463505
BTB 201..303 CDD:395526
BTB 341..455 CDD:395526 19/114 (17%)
BACK 507..628 CDD:197943 13/51 (25%)
F5_F8_type_C 711..846 CDD:459925
Blue background indicates that the domain is not in the aligned region.

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