DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G25330

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_180105.1 Gene:AT2G25330 / 817071 AraportID:AT2G25330 Length:693 Species:Arabidopsis thaliana


Alignment Length:357 Identity:79/357 - (22%)
Similarity:139/357 - (38%) Gaps:84/357 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   486 KFSYMWTINNFSFC------REEMGEVLKSSTFSAGANDKLKWC-LRVNPKGLDEESKDYLSLYL 543
            |||  |.|.||:..      |:..|..:||..|..|..|    | |.|.|:| ..:...:||::|
plant   359 KFS--WRIENFTSLVDLLEKRKITGLYIKSKRFQIGNRD----CRLIVYPRG-QSQPPSHLSIFL 416

  Fly   544 LLVSCNKS----EVRAKFKFSILNAKREETKAMESQRAYRFVQG-KDWGFKKFIRRDFLLDEANG 603
            .:.....|    ......:.|::| :|.|.|::..:...||.:. ||||:::|:....|.|:.:|
plant   417 EVTDSRSSSSDWSCFVSHRLSVVN-QRSEEKSVTKESQNRFSKAEKDWGWREFVTLTSLFDQDSG 480

  Fly   604 LLPEDKLTIFCEV------SVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVG 662
            .|.:|.:....||      |:..|.......|::.|               .|....|..|..| 
plant   481 FLVQDSVVFSVEVLMLKETSLTKDYTEAESASSVSQ---------------IDKTVKSSFTWKV- 529

  Fly   663 GREFQAHKAILAARSDVFAAMFEH---EMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEKM 724
             ..|.|.|.|:..|. :|:..|:.   |:      |:.:    :|....:..::.:|::...:  
plant   530 -ENFLAFKGIMEKRK-IFSKFFQAGGCEL------RIGV----YESFDTICIYLESGQSAGND-- 580

  Fly   725 ADDLLAAADKYALEKLK-----VMCEEALCVNLSVETAAETLILADLHSADQ--LKAQTIDFINT 782
            .|:.|....|..:...|     |..|.:||......:....:.::|:..||.  |...|:.|:  
plant   581 VDNNLWVKYKMGILNQKNPAKSVWKESSLCTKTWNNSVLLFMKVSDMLEADAGFLVRDTLVFV-- 643

  Fly   783 HATDVMETSGW--------------QNMITTH 800
              .::::...|              |:.:||:
plant   644 --CEILDCCPWFEFSDLEVLASDDVQDALTTN 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 43/152 (28%)
BTB_POZ_roadkill-like 637..757 CDD:349654 23/127 (18%)
BACK_roadkill_like 752..825 CDD:350595 10/65 (15%)
AT2G25330NP_180105.1 MATH 49..175 CDD:238068
MATH 203..334 CDD:238068
MATH 358..493 CDD:238068 40/141 (28%)
MATH 524..646 CDD:238068 27/140 (19%)
Blue background indicates that the domain is not in the aligned region.

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