DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G25320

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001324607.1 Gene:AT2G25320 / 817070 AraportID:AT2G25320 Length:1674 Species:Arabidopsis thaliana


Alignment Length:99 Identity:20/99 - (20%)
Similarity:34/99 - (34%) Gaps:33/99 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 SREDADRVFCDCLEENANWFVRNLIEPIFCKSVQ-TYAIWQKFTNQNSWSSQFTIKPPTTTTTTE 131
            |.||......:.|.|.|...:|.|:  :.||.:. ||.        ..|..:.            
plant   578 SSEDLKETTTEHLNEFAGEGLRTLV--LACKELNPTYF--------RDWKQRH------------ 620

  Fly   132 SPLNYYLELLHQREREFELRKEQEARRREELERE 165
                      |:.....:.|:|:.|:..||:|::
plant   621 ----------HEASTSLDDREEKLAKLYEEIEKD 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654
BACK_roadkill_like 752..825 CDD:350595
AT2G25320NP_001324607.1 MATH 75..201 CDD:238068
MATH 237..368 CDD:238068
MATH 404..538 CDD:238068
MATH 570..692 CDD:238068 20/99 (20%)
FancD2 739..>839 CDD:464225
FANC 936..>1304 CDD:473054
SMC_prok_B 1342..>1616 CDD:274008
Blue background indicates that the domain is not in the aligned region.

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