DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G05420

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_178610.1 Gene:AT2G05420 / 815090 AraportID:AT2G05420 Length:297 Species:Arabidopsis thaliana


Alignment Length:188 Identity:50/188 - (26%)
Similarity:73/188 - (38%) Gaps:49/188 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 WTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDY-------LSLYLLLVSC 548
            |.|.|||..:...   :.|..|..|   ..||.|:..|||  .|...|       |:|||.:.:.
plant    12 WVIENFSSLQSAS---IHSDQFVVG---DCKWRLKAYPKG--NEKATYLAYRANNLALYLNVANS 68

  Fly   549 NKSEV----RAKFKFSILNAKREE-TKAMESQRAYRFVQGKDWGFKKFIRRDF-------LLDEA 601
            ....:    ..||..:::|.|.|: :|..|||.         |...|...|.|       .|...
plant    69 KSFPIGWTRHTKFSLTLVNQKSEKLSKLTESQH---------WFDHKSTSRGFPAMIPLTNLHTN 124

  Fly   602 NGLLPEDKLTIFCEVSV--VADSVNISGQSNIVQ-------FKV-PECKLSEDLGNLF 649
            .|.|...:||:..:|.|  |...:::|.:|:.|.       |:| |:.   |.:..||
plant   125 EGFLVNGELTLVAKVEVLEVVGKLDVSKKSSPVMETIDVNGFQVLPQI---ESVNRLF 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 41/150 (27%)
BTB_POZ_roadkill-like 637..757 CDD:349654 4/13 (31%)
BACK_roadkill_like 752..825 CDD:350595
AT2G05420NP_178610.1 MATH 9..140 CDD:238068 38/144 (26%)
Blue background indicates that the domain is not in the aligned region.

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