DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G05410

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001323718.1 Gene:AT2G05410 / 815089 AraportID:AT2G05410 Length:303 Species:Arabidopsis thaliana


Alignment Length:320 Identity:70/320 - (21%)
Similarity:119/320 - (37%) Gaps:99/320 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 WTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKS---- 551
            |.|.|||..:   ...:.|..|..|.   .||.:...|||:: ::.|..||: |.|..|:|    
plant    11 WVIKNFSSLQ---SAPIYSDIFVVGG---CKWRIMAYPKGIN-KAHDSFSLF-LNVPDNESLPTG 67

  Fly   552 -EVRAKFKFSILN------AKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDK 609
             ...||..||::|      ::|:.|:....|:|:      .|||...|... .|:...|.|...:
plant    68 WRRHAKVSFSLVNQGSEKLSQRKVTQHWFVQKAF------TWGFPVMITHT-ELNAKMGFLVNGE 125

  Fly   610 LTIFCEVSV--VADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAI 672
            |.:..::.|  |...:::|.:|:      |..|                 |:.|.|  ||    :
plant   126 LKVVAKIE
VLEVVGKLDVSKESS------PIMK-----------------TIDVNG--FQ----V 161

  Fly   673 LAARSDVFAAMFEHEME------------------------------ERKLNRVAITDVDHEVLK 707
            |.::.|....:||..::                              .::|:...::|..    .
plant   162 LPSQVDSVKRLFEKNLDIVSKFRLKNPYLKTACMNLLLSLTETLCQSPQELSNDGLSDAG----V 222

  Fly   708 EMLRFIYTG-KAPNLEKMADDLLAAADK--YALEKLKVMCEE-----ALCVNLSVETAAE 759
            .:...|.|| |...|||..|:|.....|  ..|.:|:.|.|:     ..|:::..:.:.|
plant   223 ALAYLIETGLKLDWLEKKLDELKEKKKKEESCLVRLREMDEQLQPFKKRCLDIEDQISKE 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 39/142 (27%)
BTB_POZ_roadkill-like 637..757 CDD:349654 28/157 (18%)
BACK_roadkill_like 752..825 CDD:350595 1/8 (13%)
AT2G05410NP_001323718.1 MATH 8..133 CDD:238068 37/136 (27%)

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