DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G05330

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_178602.1 Gene:AT2G05330 / 815081 AraportID:AT2G05330 Length:215 Species:Arabidopsis thaliana


Alignment Length:162 Identity:34/162 - (20%)
Similarity:73/162 - (45%) Gaps:9/162 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   659 LSVGGREFQAHKAILAARSDVFAAMFEHE---MEERKLNRVAITDVDHEVLKEMLRFIYTG---K 717
            |:.|.|::   ..::|:||.|...|.|.:   ...:::..:.:.::..|.|:..:.|:|:.   .
plant    24 LTYGSRQW---IVMMASRSAVLKKMLESDEFKTSAKQVGTITLLEMKQEELEAFVEFLYSDGSML 85

  Fly   718 APNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINT 782
            :..:::.|..|..|||||.:.:|:.:|...|..:|:...:...|.||.:.....|....:.:|.|
plant    86 SSKVKQHARALYRAADKYEILRLRELCRSELISSLNSTNSLNLLELAQIPFDKVLNDAALSYIKT 150

  Fly   783 HATDVMETSGWQNMITTHSHLIAEAFRALATQ 814
            :.........::..:..:.:|..|...|..|:
plant   151 NELMFPSFDEFKLFVDNYPNLAVEVMMASLTR 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 24/103 (23%)
BACK_roadkill_like 752..825 CDD:350595 11/63 (17%)
AT2G05330NP_178602.1 BTB_POZ <35..120 CDD:453885 20/84 (24%)
Ribosomal_L37e 186..>215 CDD:469997
Blue background indicates that the domain is not in the aligned region.

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