DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and AT2G01790

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_178288.1 Gene:AT2G01790 / 814710 AraportID:AT2G01790 Length:269 Species:Arabidopsis thaliana


Alignment Length:317 Identity:74/317 - (23%)
Similarity:113/317 - (35%) Gaps:126/317 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   490 MWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEV- 553
            :|.||||||...:.   :.|..|..|.   .||||...|:|.:....||.||||.:..   ||. 
plant    10 LWVINNFSFLDSDR---VYSDIFVVGG---CKWCLLALPEGNNNYIYDYFSLYLCVPD---SEYL 65

  Fly   554 ------RAKFKFSILNAKREETKAMESQRAYRFVQGKDW--------GFKKFIRRDFLLDEANGL 604
                  |||..|:::|   :.|..:..|:     :|..|        ||....|.........|.
plant    66 PSGWRRRAKVSFTMVN---QVTGELSQQQ-----EGVYWFDEKNTTQGFGSMFRLLVFQSSYKGF 122

  Fly   605 LPEDKLTIFCEVSVV-----------ADSVNISG------------------------------- 627
            |...::.|..||.||           ::|::.:|                               
plant   123 LVNGEVDIVAEVDVVEVIGKLDVSEESESIDSNGFDVLASQVESVNSLFGKYPCFASKLCPKTPR 187

  Fly   628 -QSNIVQFKVPE--CKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEME 689
             :.|:|| .:.|  ||.:::|.|               |...:|:.|:    ..|..|.|:.:..
plant   188 LKKNVVQ-SLNEILCKSTKELSN---------------GDLAEAYSAL----RFVTKAGFKLDWL 232

  Fly   690 ERKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEE 746
            |:|             |||      |||: .|:::.:|         |:.|||.|.:
plant   233 EKK-------------LKE------TGKS-RLQEIEED---------LKDLKVKCAD 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 43/156 (28%)
BTB_POZ_roadkill-like 637..757 CDD:349654 26/112 (23%)
BACK_roadkill_like 752..825 CDD:350595
AT2G01790NP_178288.1 MATH 11..135 CDD:238068 40/140 (29%)
Blue background indicates that the domain is not in the aligned region.

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