DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Spopl

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:XP_006498475.1 Gene:Spopl / 76857 MGIID:1924107 Length:404 Species:Mus musculus


Alignment Length:325 Identity:237/325 - (72%)
Similarity:270/325 - (83%) Gaps:18/325 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 CLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWG 587
            ||||||||||:|||||||||||||||.|||||||||||:||.|||||||||||||||||||||||
Mouse    80 CLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNDKREETKAMESQRAYRFVQGKDWG 144

  Fly   588 FKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNE 652
            |||||||||||||||||||:||||:|||||||.||||:||.::....|||||:|:||||||::|.
Mouse   145 FKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNVSGHTSTNTLKVPECRLAEDLGNLWENT 209

  Fly   653 KFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGK 717
            :|:|....|.|:||:|||::|||||.||.|||||||||...|||.|.|:|.||.|||:||:||||
Mouse   210 RFTDCCFFVRGKEFKAHKSVLAARSPVFNAMFEHEMEECTKNRVEINDLDPEVFKEMMRFVYTGK 274

  Fly   718 APNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFI-- 780
            ||||:||||:|||||||||||:||||||||||.|||||..|:||:|||||||:|||||.||||  
Mouse   275 APNLDKMADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINR 339

  Fly   781 ----------------NTHATDVMETSGWQNMITTHSHLIAEAFRALATQQIPPIGPPRKRVKMS 829
                            |..|||:||||||::||.:|.||:||||||||:.|.|..|.||||:|.|
Mouse   340 CSVLRQLGCKDGKNWNNNQATDIMETSGWKSMIQSHPHLVAEAFRALASSQCPQFGIPRKRLKQS 404

  Fly   830  829
            Mouse   405  404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 91/97 (94%)
BTB_POZ_roadkill-like 637..757 CDD:349654 87/119 (73%)
BACK_roadkill_like 752..825 CDD:350595 51/90 (57%)
SpoplXP_006498475.1 MATH <80..178 CDD:445786 91/97 (94%)
BTB_POZ 191..313 CDD:453885 88/121 (73%)
BACK_SPOPL 309..404 CDD:350594 54/94 (57%)

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