DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Rhobtb3

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_082769.1 Gene:Rhobtb3 / 73296 MGIID:1920546 Length:611 Species:Mus musculus


Alignment Length:488 Identity:103/488 - (21%)
Similarity:159/488 - (32%) Gaps:167/488 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 NQQQPQQSPLCLVLLVKCPNSKE--------------------------FCNAAANFCDKRLPVN 435
            |::.|...|||......|..:.|                          |......|..:.|...
Mouse   138 NEELPCTCPLCTSDRGSCVTTTEGIQLAKELGATYLELHSLDDFYIGKYFGGVLEYFMIQALNQK 202

  Fly   436 ECQASQTARVTSNLHASSSTMAVSRVPSPPLPEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCR 500
            ..:..:..::||:.|.       .|.|....|| ..||        :|.....|...:||...|.
Mouse   203 TSEKMKKRKMTSSFHG-------IRPPQLEQPE-KMPV--------LKAEASHYHSDLNNLLLCC 251

  Fly   501 EEMGEVLKSSTFSAGANDKLKWCLRV---NPK--GLDEESKDYLSLYLLLVSCNKSEVRAKFKFS 560
            :                     |:.|   :|:  |:.|..|        :|.|:.|.|     |.
Mouse   252 Q---------------------CVDVVFYHPEVTGVVEAHK--------IVLCSVSHV-----FM 282

  Fly   561 IL-NAK-----REETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPED-------KLTI 612
            :| |.|     ::.:....:|..:.            |.||.:|..|:...|.:       |..:
Mouse   283 LLFNVKSPADIQDSSIIRTTQDLFA------------INRDAVLPGASQEAPSNPPLPVIVKDAL 335

  Fly   613 FCEVSVVADSVNI---------------------SGQ-SNIVQ-----FKVP-------ECK--- 640
            ||  |.::|.:..                     ||. |:|::     .|.|       .||   
Mouse   336 FC--SCLSDILRFIYSGAFQWEELEEDVRRKLKDSGDVSDIIEKVKCILKTPGKINCLRNCKTYQ 398

  Fly   641 -------LSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAI 698
                   .:..|....:....:||...:.|....||:|||.||.:|.||||.....|.|...:.:
Mouse   399 ARKPLWFYNTSLKFFLNKPMLADVVFEIQGATVPAHRAILVARCEVMAAMFNGNYMEAKSVLIPV 463

  Fly   699 TDVDHEVLKEMLRFIYTGK---APNLEKMADDLLAAADKYALEKLKVMCEEALCVNL----SVET 756
            ..|..|.....|.::||..   |...:.|.  ||..|:.|.:.:|:.:||..:...|    |.|.
Mouse   464 YGVSKETFLSFLEYLYTDSCCPAGIFQAMC--LLICAEMYQVSRLQHICELFIITQLQSMPSREL 526

  Fly   757 AAETLILADL------HSADQLKAQTIDFINTH 783
            |:..|.:.||      |.:|.|....:.||.|:
Mouse   527 ASMNLDIVDLLKKAKFHHSDCLSTWLLHFIATN 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 30/155 (19%)
BTB_POZ_roadkill-like 637..757 CDD:349654 38/143 (27%)
BACK_roadkill_like 752..825 CDD:350595 13/42 (31%)
Rhobtb3NP_082769.1 Rho-like 1..175 7/36 (19%)
P-loop containing Nucleoside Triphosphate Hydrolases 34..174 CDD:476819 7/35 (20%)
BTB1_POZ_RHOBTB3 236..393 CDD:349666 36/204 (18%)
BTB2_POZ_RHOBTB3 410..519 CDD:349669 32/110 (29%)
Interaction with Rab9. /evidence=ECO:0000250 420..611 44/142 (31%)
BACK_RHOBTB3 529..611 CDD:350607 9/31 (29%)

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