DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and klhl40a

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001122154.1 Gene:klhl40a / 553257 ZFINID:ZDB-GENE-050916-1 Length:612 Species:Danio rerio


Alignment Length:140 Identity:42/140 - (30%)
Similarity:67/140 - (47%) Gaps:0/140 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   641 LSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEV 705
            |.:.|.:|.|..||.|..|.:..:||..|:.:|||.|..|.|||..::||.|...:.:.|::..:
Zfish    20 LQDGLCDLLDANKFVDCILKIKDKEFPCHRLVLAATSPYFKAMFLSDLEESKKREIVLKDIEPGI 84

  Fly   706 LKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSAD 770
            :..:||:|||......|:...|:..||:.|.:..:..:|...|...|.:........|..|....
Zfish    85 MGMILRYIYTSDINLTEQNVQDIFMAANMYQIPSIFSVCVSYLQQKLVLSNCLAIFRLGLLLDCP 149

  Fly   771 QLKAQTIDFI 780
            :|..:..|||
Zfish   150 RLAMEARDFI 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743
BTB_POZ_roadkill-like 637..757 CDD:349654 36/115 (31%)
BACK_roadkill_like 752..825 CDD:350595 7/29 (24%)
klhl40aNP_001122154.1 BTB_POZ_KLHL40_KBTBD5 7..140 CDD:349649 36/119 (30%)
PHA03098 48..540 CDD:222983 32/112 (29%)
BACK_KLHL40_KBTBD5 131..229 CDD:350591 7/29 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..290
KELCH repeat 341..388 CDD:276965
Kelch 1 350..402
KELCH repeat 392..438 CDD:276965
Kelch 2 403..452
KELCH repeat 442..487 CDD:276965
Kelch 3 453..500
KELCH repeat 490..535 CDD:276965
PRK14131 500..>585 CDD:237617
Kelch 4 502..547
Kelch 5 549..604
Blue background indicates that the domain is not in the aligned region.

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