DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and K08E4.7

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_001076695.1 Gene:K08E4.7 / 4927039 WormBaseID:WBGene00045036 Length:326 Species:Caenorhabditis elegans


Alignment Length:274 Identity:58/274 - (21%)
Similarity:115/274 - (41%) Gaps:50/274 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 LRVNPKGLDEESKDYLSLYLLLVSCN--------KSEVRAKFKFSILNAKREETKAMESQRAYRF 580
            :|..|..|....||.:.   :.:|||        |.|.....:.:..:.:.:....||:     .
 Worm    43 IRNLPWTLSLVKKDQIK---VTISCNEDSSSNVWKCEADIALEINYHDVRSDTPTKMET-----I 99

  Fly   581 VQGKDWGFKKFIRRDFL---LDEANGLLP-EDKLTIFCEVSVVADSVNISG--QSNIVQFKVPEC 639
            .:|:.:.|.|.|..:.:   :|..||.:. :..:|:..:|.|    ..:.|  :..::.|..   
 Worm   100 FEGRKFDFNKRIMEETVEQWIDVFNGKIELKGAITVTAKVKV----TKLYGYRKRKMLDFST--- 157

  Fly   640 KLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHE 704
                      ::..:.|..|.|..::....|..||.:|..|..:|..:.:|::...|.|..|.::
 Worm   158 ----------NHPDYFDGVLLVENKKIYVQKRYLATKSTYFWNIFFGDFKEKEQEAVEIPGVKYD 212

  Fly   705 VLKEMLRFI-YTGKAPNLEKMADDLLAAADKYALEKLKVMCEEAL----CVNLSVETAAETLILA 764
            .:.:.|.|| :|....|:|.: ::::..||.:.::.|...||:.|    .|||     |:.||.|
 Worm   213 DVIQFLNFIHHTDSQINIETI-ENMMVLADLFLIDCLMCCCEKILIKADSVNL-----AKKLIWA 271

  Fly   765 DLHSADQLKAQTID 778
            :..:.::|....:|
 Worm   272 ERFALNELMDHCLD 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 22/108 (20%)
BTB_POZ_roadkill-like 637..757 CDD:349654 28/124 (23%)
BACK_roadkill_like 752..825 CDD:350595 7/27 (26%)
K08E4.7NP_001076695.1 BTB 158..258 CDD:395526 25/100 (25%)

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