DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Tdpoz4

DIOPT Version :9

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_997155.2 Gene:Tdpoz4 / 399675 MGIID:3027904 Length:370 Species:Mus musculus


Alignment Length:352 Identity:189/352 - (53%)
Similarity:237/352 - (67%) Gaps:2/352 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   480 TQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLL 544
            ||....|..|.|||:||||..||..|.:.|..||...|||:.|||||.|.|:||::|||:||||:
Mouse    13 TQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLI 77

  Fly   545 LVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDK 609
            |:||.|..|.|||:..|||||.|:..........|....:.:||:|||.||..|..|..|.|:||
Mouse    78 LLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDK 142

  Fly   610 LTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILA 674
            .|:.|:|||:.||.:||||:.....||..|.|..|:|.|::|..|:|.:|.|.|.||:|||||||
Mouse   143 FTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILA 207

  Fly   675 ARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNL--EKMADDLLAAADKYAL 737
            |||.||.||||||||||..|.|.|.|:|.:|.|||:.||||||.|:|  ..||.|||||||:|.|
Mouse   208 ARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGL 272

  Fly   738 EKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHSH 802
            |.|.||||:|||.:||||.||.|||:|||||.:.||.|.:|||..:|::|.:||||.:|:.:|..
Mouse   273 EDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPR 337

  Fly   803 LIAEAFRALATQQIPPIGPPRKRVKMS 829
            |:||||.:||:.|......|.|::|.|
Mouse   338 LVAEAFHSLASAQRVFWALPFKQLKWS 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 67/137 (49%)
BTB 645..749 CDD:279045 67/105 (64%)
BTB 656..752 CDD:197585 65/97 (67%)
SPOP_C 752..814 CDD:269807 35/61 (57%)
Tdpoz4NP_997155.2 MATH 16..154 CDD:295307 67/137 (49%)
BTB 180..284 CDD:279045 66/103 (64%)
BTB 189..287 CDD:197585 65/97 (67%)
SPOP_C 287..349 CDD:269807 35/61 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1987
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D864323at2759
OrthoFinder 1 1.000 - - FOG0000398
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24413
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X131
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.880

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