DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdx and Tdpoz4

DIOPT Version :10

Sequence 1:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster
Sequence 2:NP_997155.2 Gene:Tdpoz4 / 399675 MGIID:3027904 Length:370 Species:Mus musculus


Alignment Length:352 Identity:189/352 - (53%)
Similarity:237/352 - (67%) Gaps:2/352 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   480 TQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLL 544
            ||....|..|.|||:||||..||..|.:.|..||...|||:.|||||.|.|:||::|||:||||:
Mouse    13 TQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLI 77

  Fly   545 LVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDK 609
            |:||.|..|.|||:..|||||.|:..........|....:.:||:|||.||..|..|..|.|:||
Mouse    78 LLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDK 142

  Fly   610 LTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILA 674
            .|:.|:|||:.||.:||||:.....||..|.|..|:|.|::|..|:|.:|.|.|.||:|||||||
Mouse   143 FTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILA 207

  Fly   675 ARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNL--EKMADDLLAAADKYAL 737
            |||.||.||||||||||..|.|.|.|:|.:|.|||:.||||||.|:|  ..||.|||||||:|.|
Mouse   208 ARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGL 272

  Fly   738 EKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHSH 802
            |.|.||||:|||.:||||.||.|||:|||||.:.||.|.:|||..:|::|.:||||.:|:.:|..
Mouse   273 EDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPR 337

  Fly   803 LIAEAFRALATQQIPPIGPPRKRVKMS 829
            |:||||.:||:.|......|.|::|.|
Mouse   338 LVAEAFHSLASAQRVFWALPFKQLKWS 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 67/137 (49%)
BTB_POZ_roadkill-like 637..757 CDD:349654 76/121 (63%)
BACK_roadkill_like 752..825 CDD:350595 37/72 (51%)
Tdpoz4NP_997155.2 MATH 16..154 CDD:445786 67/137 (49%)
BTB_POZ_TDPOZ 165..292 CDD:349653 78/126 (62%)
BACK_Tdpoz 287..353 CDD:350596 36/65 (55%)

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